Protein–RNA interactions for Protein: Q96QP1

ALPK1, Alpha-protein kinase 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1Q96QP1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ALPK1Q96QP1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ALPK1Q96QP1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ALPK1Q96QP1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK1Q96QP1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.78■□□□□ 0.92
ALPK1Q96QP1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK1Q96QP1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK1Q96QP1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.78■□□□□ 0.92
ALPK1Q96QP1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK1Q96QP1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ALPK1Q96QP1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK1Q96QP1 LINC00526-201ENST00000581067 1875 ntBASIC20.77■□□□□ 0.92
ALPK1Q96QP1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK1Q96QP1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK1Q96QP1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK1Q96QP1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK1Q96QP1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.77■□□□□ 0.92
ALPK1Q96QP1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.77■□□□□ 0.92
ALPK1Q96QP1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.77■□□□□ 0.92
ALPK1Q96QP1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.77■□□□□ 0.92
ALPK1Q96QP1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK1Q96QP1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.77■□□□□ 0.91
ALPK1Q96QP1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.77■□□□□ 0.91
ALPK1Q96QP1 AL121603.2-201ENST00000557373 2117 ntBASIC20.77■□□□□ 0.91
ALPK1Q96QP1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK1Q96QP1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK1Q96QP1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 MIR638-201ENST00000385237 100 ntBASIC20.74■□□□□ 0.91
ALPK1Q96QP1 BX664725.1-201ENST00000438252 379 ntBASIC20.74■□□□□ 0.91
ALPK1Q96QP1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK1Q96QP1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALPK1Q96QP1 ECEL1P1-201ENST00000373592 1742 ntBASIC20.73■□□□□ 0.91
ALPK1Q96QP1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALPK1Q96QP1 AC127496.7-201ENST00000625110 1798 ntBASIC20.73■□□□□ 0.91
ALPK1Q96QP1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ALPK1Q96QP1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ALPK1Q96QP1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.73■□□□□ 0.91
ALPK1Q96QP1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.73■□□□□ 0.91
ALPK1Q96QP1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.73■□□□□ 0.91
ALPK1Q96QP1 MIR4787-201ENST00000607364 84 ntBASIC20.73■□□□□ 0.91
ALPK1Q96QP1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.73■□□□□ 0.91
ALPK1Q96QP1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
ALPK1Q96QP1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALPK1Q96QP1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.72■□□□□ 0.91
ALPK1Q96QP1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALPK1Q96QP1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALPK1Q96QP1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ALPK1Q96QP1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.72■□□□□ 0.91
ALPK1Q96QP1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALPK1Q96QP1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALPK1Q96QP1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALPK1Q96QP1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms