Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL21A1Q96P44 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL21A1Q96P44 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL21A1Q96P44 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.92■□□□□ 0.94
COL21A1Q96P44 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
COL21A1Q96P44 LINC00565-201ENST00000562710 2331 ntBASIC20.92■□□□□ 0.94
COL21A1Q96P44 EP400NL-214ENST00000641289 2402 ntBASIC20.92■□□□□ 0.94
COL21A1Q96P44 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.92■□□□□ 0.94
COL21A1Q96P44 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL21A1Q96P44 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL21A1Q96P44 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL21A1Q96P44 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
COL21A1Q96P44 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL21A1Q96P44 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.91■□□□□ 0.94
COL21A1Q96P44 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL21A1Q96P44 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL21A1Q96P44 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL21A1Q96P44 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL21A1Q96P44 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL21A1Q96P44 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL21A1Q96P44 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.91■□□□□ 0.94
COL21A1Q96P44 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL21A1Q96P44 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
COL21A1Q96P44 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.91■□□□□ 0.94
COL21A1Q96P44 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL21A1Q96P44 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
COL21A1Q96P44 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.91■□□□□ 0.94
COL21A1Q96P44 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL21A1Q96P44 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.91■□□□□ 0.94
COL21A1Q96P44 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
COL21A1Q96P44 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.91■□□□□ 0.94
COL21A1Q96P44 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
COL21A1Q96P44 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL21A1Q96P44 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL21A1Q96P44 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COL21A1Q96P44 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL21A1Q96P44 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COL21A1Q96P44 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL21A1Q96P44 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.9■□□□□ 0.94
COL21A1Q96P44 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL21A1Q96P44 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL21A1Q96P44 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL21A1Q96P44 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.9■□□□□ 0.94
COL21A1Q96P44 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL21A1Q96P44 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.9■□□□□ 0.94
COL21A1Q96P44 AC079630.1-202ENST00000618127 1840 ntBASIC20.9■□□□□ 0.94
COL21A1Q96P44 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
COL21A1Q96P44 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
COL21A1Q96P44 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL21A1Q96P44 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
COL21A1Q96P44 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.89■□□□□ 0.94
COL21A1Q96P44 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL21A1Q96P44 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL21A1Q96P44 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.89■□□□□ 0.93
COL21A1Q96P44 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.89■□□□□ 0.93
COL21A1Q96P44 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL21A1Q96P44 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.89■□□□□ 0.93
COL21A1Q96P44 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL21A1Q96P44 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL21A1Q96P44 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL21A1Q96P44 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.88■□□□□ 0.93
COL21A1Q96P44 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
COL21A1Q96P44 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL21A1Q96P44 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL21A1Q96P44 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
COL21A1Q96P44 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.88■□□□□ 0.93
COL21A1Q96P44 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL21A1Q96P44 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL21A1Q96P44 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.88■□□□□ 0.93
COL21A1Q96P44 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL21A1Q96P44 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.88■□□□□ 0.93
COL21A1Q96P44 AL356740.2-201ENST00000601559 647 ntBASIC20.88■□□□□ 0.93
COL21A1Q96P44 AL117332.1-201ENST00000622628 974 ntBASIC20.88■□□□□ 0.93
COL21A1Q96P44 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.88■□□□□ 0.93
COL21A1Q96P44 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
COL21A1Q96P44 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
COL21A1Q96P44 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.88■□□□□ 0.93
COL21A1Q96P44 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL21A1Q96P44 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL21A1Q96P44 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL21A1Q96P44 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL21A1Q96P44 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL21A1Q96P44 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL21A1Q96P44 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL21A1Q96P44 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL21A1Q96P44 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL21A1Q96P44 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL21A1Q96P44 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL21A1Q96P44 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL21A1Q96P44 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
COL21A1Q96P44 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.86■□□□□ 0.93
COL21A1Q96P44 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.86■□□□□ 0.93
COL21A1Q96P44 MIR3621-201ENST00000580529 85 ntBASIC20.86■□□□□ 0.93
COL21A1Q96P44 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.86■□□□□ 0.93
COL21A1Q96P44 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
COL21A1Q96P44 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL21A1Q96P44 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.85■□□□□ 0.93
COL21A1Q96P44 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.85■□□□□ 0.93
COL21A1Q96P44 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL21A1Q96P44 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms