Protein–RNA interactions for Protein: Q96M98

PACRG, Parkin coregulated gene protein, humanhuman

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGQ96M98 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PACRGQ96M98 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PACRGQ96M98 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PACRGQ96M98 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PACRGQ96M98 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.83■□□□□ 0.28
PACRGQ96M98 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.83■□□□□ 0.28
PACRGQ96M98 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PACRGQ96M98 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.83■□□□□ 0.28
PACRGQ96M98 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PACRGQ96M98 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.83■□□□□ 0.28
PACRGQ96M98 MIR6089-201ENST00000616698 64 ntBASIC16.83■□□□□ 0.28
PACRGQ96M98 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PACRGQ96M98 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PACRGQ96M98 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PACRGQ96M98 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PACRGQ96M98 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACRGQ96M98 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACRGQ96M98 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACRGQ96M98 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACRGQ96M98 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PACRGQ96M98 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.82■□□□□ 0.28
PACRGQ96M98 CAHM-201ENST00000604200 896 ntBASIC16.82■□□□□ 0.28
PACRGQ96M98 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.82■□□□□ 0.28
PACRGQ96M98 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACRGQ96M98 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACRGQ96M98 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACRGQ96M98 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PACRGQ96M98 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACRGQ96M98 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACRGQ96M98 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PACRGQ96M98 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PACRGQ96M98 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACRGQ96M98 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PACRGQ96M98 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PACRGQ96M98 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACRGQ96M98 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PACRGQ96M98 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.81■□□□□ 0.28
PACRGQ96M98 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PACRGQ96M98 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACRGQ96M98 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PACRGQ96M98 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.8■□□□□ 0.28
PACRGQ96M98 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACRGQ96M98 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
PACRGQ96M98 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.8■□□□□ 0.28
PACRGQ96M98 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.8■□□□□ 0.28
PACRGQ96M98 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PACRGQ96M98 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.8■□□□□ 0.28
PACRGQ96M98 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PACRGQ96M98 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.8■□□□□ 0.28
PACRGQ96M98 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACRGQ96M98 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACRGQ96M98 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.8■□□□□ 0.28
PACRGQ96M98 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.8■□□□□ 0.28
PACRGQ96M98 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.8■□□□□ 0.28
PACRGQ96M98 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.8■□□□□ 0.28
PACRGQ96M98 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
PACRGQ96M98 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACRGQ96M98 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PACRGQ96M98 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PACRGQ96M98 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACRGQ96M98 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PACRGQ96M98 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PACRGQ96M98 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PACRGQ96M98 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PACRGQ96M98 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.79■□□□□ 0.28
PACRGQ96M98 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.79■□□□□ 0.28
PACRGQ96M98 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PACRGQ96M98 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PACRGQ96M98 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACRGQ96M98 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
PACRGQ96M98 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PACRGQ96M98 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.78■□□□□ 0.28
PACRGQ96M98 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.78■□□□□ 0.28
PACRGQ96M98 MIR762-201ENST00000390236 83 ntBASIC16.78■□□□□ 0.28
PACRGQ96M98 AC136428.2-201ENST00000563187 214 ntBASIC16.78■□□□□ 0.28
PACRGQ96M98 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.78■□□□□ 0.28
PACRGQ96M98 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACRGQ96M98 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms