Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC29.81■■■□□ 2.36
CFAP53Q96M91 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
CFAP53Q96M91 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CFAP53Q96M91 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.81■■■□□ 2.36
CFAP53Q96M91 SUDS3P1-201ENST00000505831 966 ntBASIC29.81■■■□□ 2.36
CFAP53Q96M91 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.81■■■□□ 2.36
CFAP53Q96M91 AC142381.2-201ENST00000566120 298 ntBASIC29.81■■■□□ 2.36
CFAP53Q96M91 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.81■■■□□ 2.36
CFAP53Q96M91 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
CFAP53Q96M91 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
CFAP53Q96M91 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC29.81■■■□□ 2.36
CFAP53Q96M91 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC29.8■■■□□ 2.36
CFAP53Q96M91 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC29.8■■■□□ 2.36
CFAP53Q96M91 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CFAP53Q96M91 AP001330.3-201ENST00000520123 633 ntBASIC29.8■■■□□ 2.36
CFAP53Q96M91 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC29.8■■■□□ 2.36
CFAP53Q96M91 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
CFAP53Q96M91 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFAP53Q96M91 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFAP53Q96M91 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC29.79■■■□□ 2.36
CFAP53Q96M91 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CFAP53Q96M91 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CFAP53Q96M91 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CFAP53Q96M91 AF213884.3-201ENST00000563833 479 ntBASIC29.79■■■□□ 2.36
CFAP53Q96M91 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC29.79■■■□□ 2.36
CFAP53Q96M91 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CFAP53Q96M91 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CFAP53Q96M91 AC019069.1-201ENST00000610008 1333 ntBASIC29.78■■■□□ 2.36
CFAP53Q96M91 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CFAP53Q96M91 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.78■■■□□ 2.36
CFAP53Q96M91 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CFAP53Q96M91 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFAP53Q96M91 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CFAP53Q96M91 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFAP53Q96M91 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFAP53Q96M91 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFAP53Q96M91 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC29.77■■■□□ 2.36
CFAP53Q96M91 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
CFAP53Q96M91 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC29.77■■■□□ 2.36
CFAP53Q96M91 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFAP53Q96M91 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
CFAP53Q96M91 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFAP53Q96M91 MIR939-201ENST00000401314 82 ntBASIC29.77■■■□□ 2.36
CFAP53Q96M91 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC29.77■■■□□ 2.36
CFAP53Q96M91 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
CFAP53Q96M91 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
CFAP53Q96M91 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC29.77■■■□□ 2.36
CFAP53Q96M91 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC29.77■■■□□ 2.36
CFAP53Q96M91 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CFAP53Q96M91 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CFAP53Q96M91 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.76■■■□□ 2.35
CFAP53Q96M91 BX842568.3-201ENST00000418104 571 ntBASIC29.76■■■□□ 2.35
CFAP53Q96M91 AL136967.2-201ENST00000623968 743 ntBASIC29.76■■■□□ 2.35
CFAP53Q96M91 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CFAP53Q96M91 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC29.76■■■□□ 2.35
CFAP53Q96M91 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
CFAP53Q96M91 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CFAP53Q96M91 AC027682.1-201ENST00000562846 899 ntBASIC29.75■■■□□ 2.35
CFAP53Q96M91 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CFAP53Q96M91 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
CFAP53Q96M91 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP53Q96M91 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP53Q96M91 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP53Q96M91 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP53Q96M91 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP53Q96M91 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP53Q96M91 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP53Q96M91 OR2I1P-207ENST00000453522 948 ntBASIC29.74■■■□□ 2.35
CFAP53Q96M91 AC008764.7-201ENST00000593779 1081 ntBASIC29.74■■■□□ 2.35
CFAP53Q96M91 AC233992.3-201ENST00000607491 485 ntBASIC29.74■■■□□ 2.35
CFAP53Q96M91 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CFAP53Q96M91 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP53Q96M91 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP53Q96M91 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP53Q96M91 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC29.73■■■□□ 2.35
CFAP53Q96M91 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC29.73■■■□□ 2.35
CFAP53Q96M91 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC29.73■■■□□ 2.35
CFAP53Q96M91 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP53Q96M91 AC091305.1-201ENST00000479476 895 ntBASIC29.73■■■□□ 2.35
CFAP53Q96M91 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
CFAP53Q96M91 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC29.73■■■□□ 2.35
CFAP53Q96M91 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC29.73■■■□□ 2.35
CFAP53Q96M91 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC29.72■■■□□ 2.35
CFAP53Q96M91 AC004687.1-201ENST00000579003 1625 ntBASIC29.72■■■□□ 2.35
CFAP53Q96M91 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP53Q96M91 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC29.72■■■□□ 2.35
CFAP53Q96M91 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
CFAP53Q96M91 SLC47A1P1-202ENST00000449666 945 ntBASIC29.72■■■□□ 2.35
CFAP53Q96M91 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CFAP53Q96M91 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC29.72■■■□□ 2.35
CFAP53Q96M91 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC29.72■■■□□ 2.35
CFAP53Q96M91 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP53Q96M91 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP53Q96M91 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP53Q96M91 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.71■■■□□ 2.35
CFAP53Q96M91 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
CFAP53Q96M91 DUSP8P3-201ENST00000399571 1760 ntBASIC29.71■■■□□ 2.35
CFAP53Q96M91 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
CFAP53Q96M91 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC29.71■■■□□ 2.35
CFAP53Q96M91 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms