Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CALR3Q96L12 MIR6722-201ENST00000617286 78 ntBASIC23.51■■□□□ 1.35
CALR3Q96L12 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CALR3Q96L12 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CALR3Q96L12 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CALR3Q96L12 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
CALR3Q96L12 AC012354.3-201ENST00000623734 483 ntBASIC23.5■■□□□ 1.35
CALR3Q96L12 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CALR3Q96L12 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CALR3Q96L12 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CALR3Q96L12 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.5■■□□□ 1.35
CALR3Q96L12 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CALR3Q96L12 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.49■■□□□ 1.35
CALR3Q96L12 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.49■■□□□ 1.35
CALR3Q96L12 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CALR3Q96L12 YBX1P4-201ENST00000392794 808 ntBASIC23.49■■□□□ 1.35
CALR3Q96L12 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.49■■□□□ 1.35
CALR3Q96L12 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CALR3Q96L12 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.49■■□□□ 1.35
CALR3Q96L12 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CALR3Q96L12 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CALR3Q96L12 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CALR3Q96L12 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CALR3Q96L12 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CALR3Q96L12 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CALR3Q96L12 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
CALR3Q96L12 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.49■■□□□ 1.35
CALR3Q96L12 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.48■■□□□ 1.35
CALR3Q96L12 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CALR3Q96L12 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CALR3Q96L12 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.48■■□□□ 1.35
CALR3Q96L12 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.48■■□□□ 1.35
CALR3Q96L12 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CALR3Q96L12 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CALR3Q96L12 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CALR3Q96L12 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CALR3Q96L12 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CALR3Q96L12 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CALR3Q96L12 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CALR3Q96L12 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CALR3Q96L12 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CALR3Q96L12 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.47■■□□□ 1.35
CALR3Q96L12 AC103834.1-201ENST00000520383 144 ntBASIC23.47■■□□□ 1.35
CALR3Q96L12 AC005703.6-201ENST00000623265 1329 ntBASIC23.47■■□□□ 1.35
CALR3Q96L12 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CALR3Q96L12 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.47■■□□□ 1.35
CALR3Q96L12 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CALR3Q96L12 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CALR3Q96L12 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CALR3Q96L12 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CALR3Q96L12 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CALR3Q96L12 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CALR3Q96L12 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CALR3Q96L12 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.46■■□□□ 1.35
CALR3Q96L12 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.46■■□□□ 1.35
CALR3Q96L12 LINC01529-204ENST00000636474 1715 ntBASIC23.46■■□□□ 1.35
CALR3Q96L12 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
CALR3Q96L12 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
CALR3Q96L12 AC092053.2-201ENST00000640557 1818 ntBASIC23.45■■□□□ 1.34
CALR3Q96L12 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CALR3Q96L12 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CALR3Q96L12 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
CALR3Q96L12 AC103724.3-201ENST00000564481 992 ntBASIC23.45■■□□□ 1.34
CALR3Q96L12 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.34
CALR3Q96L12 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CALR3Q96L12 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.44■■□□□ 1.34
CALR3Q96L12 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CALR3Q96L12 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CALR3Q96L12 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.44■■□□□ 1.34
CALR3Q96L12 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.44■■□□□ 1.34
CALR3Q96L12 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CALR3Q96L12 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CALR3Q96L12 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
CALR3Q96L12 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CALR3Q96L12 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CALR3Q96L12 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.43■■□□□ 1.34
CALR3Q96L12 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CALR3Q96L12 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.43■■□□□ 1.34
CALR3Q96L12 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CALR3Q96L12 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CALR3Q96L12 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CALR3Q96L12 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CALR3Q96L12 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.42■■□□□ 1.34
CALR3Q96L12 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.42■■□□□ 1.34
CALR3Q96L12 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.42■■□□□ 1.34
CALR3Q96L12 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CALR3Q96L12 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
CALR3Q96L12 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.42■■□□□ 1.34
CALR3Q96L12 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.42■■□□□ 1.34
CALR3Q96L12 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
CALR3Q96L12 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
CALR3Q96L12 AC139530.1-201ENST00000575312 1977 ntBASIC23.41■■□□□ 1.34
CALR3Q96L12 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CALR3Q96L12 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.41■■□□□ 1.34
CALR3Q96L12 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.41■■□□□ 1.34
CALR3Q96L12 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.41■■□□□ 1.34
CALR3Q96L12 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CALR3Q96L12 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.41■■□□□ 1.34
CALR3Q96L12 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CALR3Q96L12 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms