Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 PVT1_1.1-201ENST00000615125 194 ntBASIC19.2■□□□□ 0.66
CPNE2Q96FN4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CPNE2Q96FN4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.19■□□□□ 0.66
CPNE2Q96FN4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE2Q96FN4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE2Q96FN4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE2Q96FN4 AL024507.2-201ENST00000606070 2574 ntBASIC19.18■□□□□ 0.66
CPNE2Q96FN4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE2Q96FN4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE2Q96FN4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE2Q96FN4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CPNE2Q96FN4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE2Q96FN4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE2Q96FN4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CPNE2Q96FN4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE2Q96FN4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE2Q96FN4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CPNE2Q96FN4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE2Q96FN4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE2Q96FN4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CPNE2Q96FN4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CPNE2Q96FN4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CPNE2Q96FN4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE2Q96FN4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE2Q96FN4 GUSBP5-202ENST00000510805 1989 ntBASIC19.17■□□□□ 0.66
CPNE2Q96FN4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CPNE2Q96FN4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE2Q96FN4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CPNE2Q96FN4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE2Q96FN4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CPNE2Q96FN4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE2Q96FN4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE2Q96FN4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE2Q96FN4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 AC127496.7-201ENST00000625110 1798 ntBASIC19.15■□□□□ 0.66
CPNE2Q96FN4 SNX5-217ENST00000606557 1087 ntBASIC19.15■□□□□ 0.66
CPNE2Q96FN4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.15■□□□□ 0.66
CPNE2Q96FN4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.14■□□□□ 0.66
CPNE2Q96FN4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 AL353803.4-201ENST00000565882 1934 ntBASIC19.14■□□□□ 0.65
CPNE2Q96FN4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.14■□□□□ 0.65
CPNE2Q96FN4 ECEL1P1-201ENST00000373592 1742 ntBASIC19.14■□□□□ 0.65
CPNE2Q96FN4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CPNE2Q96FN4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE2Q96FN4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE2Q96FN4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.13■□□□□ 0.65
CPNE2Q96FN4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE2Q96FN4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.13■□□□□ 0.65
CPNE2Q96FN4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms