Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL26A1Q96A83 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL26A1Q96A83 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
COL26A1Q96A83 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL26A1Q96A83 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL26A1Q96A83 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL26A1Q96A83 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.33■■□□□ 1.01
COL26A1Q96A83 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL26A1Q96A83 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL26A1Q96A83 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.33■■□□□ 1
COL26A1Q96A83 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
COL26A1Q96A83 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL26A1Q96A83 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
COL26A1Q96A83 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL26A1Q96A83 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL26A1Q96A83 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL26A1Q96A83 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL26A1Q96A83 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
COL26A1Q96A83 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL26A1Q96A83 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL26A1Q96A83 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL26A1Q96A83 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL26A1Q96A83 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL26A1Q96A83 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
COL26A1Q96A83 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.31■■□□□ 1
COL26A1Q96A83 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.31■■□□□ 1
COL26A1Q96A83 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL26A1Q96A83 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL26A1Q96A83 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL26A1Q96A83 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL26A1Q96A83 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL26A1Q96A83 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL26A1Q96A83 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
COL26A1Q96A83 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
COL26A1Q96A83 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
COL26A1Q96A83 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL26A1Q96A83 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL26A1Q96A83 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.3■■□□□ 1
COL26A1Q96A83 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.3■■□□□ 1
COL26A1Q96A83 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.3■■□□□ 1
COL26A1Q96A83 AC024257.2-201ENST00000549699 147 ntBASIC21.3■■□□□ 1
COL26A1Q96A83 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.3■■□□□ 1
COL26A1Q96A83 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COL26A1Q96A83 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL26A1Q96A83 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.3■■□□□ 1
COL26A1Q96A83 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL26A1Q96A83 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.29■■□□□ 1
COL26A1Q96A83 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.29■■□□□ 1
COL26A1Q96A83 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL26A1Q96A83 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL26A1Q96A83 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL26A1Q96A83 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL26A1Q96A83 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL26A1Q96A83 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.29■■□□□ 1
COL26A1Q96A83 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.29■■□□□ 1
COL26A1Q96A83 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL26A1Q96A83 AC009086.3-201ENST00000623486 1008 ntBASIC21.29■■□□□ 1
COL26A1Q96A83 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.29■■□□□ 1
COL26A1Q96A83 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL26A1Q96A83 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL26A1Q96A83 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL26A1Q96A83 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.28■■□□□ 1
COL26A1Q96A83 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.28■■□□□ 1
COL26A1Q96A83 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL26A1Q96A83 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL26A1Q96A83 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL26A1Q96A83 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL26A1Q96A83 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
COL26A1Q96A83 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL26A1Q96A83 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.27■■□□□ 1
COL26A1Q96A83 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL26A1Q96A83 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.27■■□□□ 1
COL26A1Q96A83 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
COL26A1Q96A83 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.27■■□□□ 1
COL26A1Q96A83 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.27■■□□□ 1
COL26A1Q96A83 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL26A1Q96A83 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL26A1Q96A83 SERBP1P1-201ENST00000396021 1160 ntBASIC21.27■■□□□ 1
COL26A1Q96A83 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.27■■□□□ 1
COL26A1Q96A83 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
COL26A1Q96A83 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.27■■□□□ 1
COL26A1Q96A83 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL26A1Q96A83 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL26A1Q96A83 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL26A1Q96A83 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
COL26A1Q96A83 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
COL26A1Q96A83 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL26A1Q96A83 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL26A1Q96A83 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.26■□□□□ 0.99
COL26A1Q96A83 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.26■□□□□ 0.99
COL26A1Q96A83 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL26A1Q96A83 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL26A1Q96A83 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL26A1Q96A83 SLC47A1P1-202ENST00000449666 945 ntBASIC21.26■□□□□ 0.99
COL26A1Q96A83 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.26■□□□□ 0.99
COL26A1Q96A83 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.26■□□□□ 0.99
COL26A1Q96A83 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL26A1Q96A83 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL26A1Q96A83 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL26A1Q96A83 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms