Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.92■□□□□ 0.78
CPNE4Q96A23 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE4Q96A23 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.92■□□□□ 0.78
CPNE4Q96A23 AC136469.2-201ENST00000623944 1028 ntBASIC19.92■□□□□ 0.78
CPNE4Q96A23 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE4Q96A23 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CPNE4Q96A23 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE4Q96A23 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.92■□□□□ 0.78
CPNE4Q96A23 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE4Q96A23 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE4Q96A23 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE4Q96A23 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.92■□□□□ 0.78
CPNE4Q96A23 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CPNE4Q96A23 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE4Q96A23 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE4Q96A23 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
CPNE4Q96A23 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CPNE4Q96A23 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.91■□□□□ 0.78
CPNE4Q96A23 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.91■□□□□ 0.78
CPNE4Q96A23 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CPNE4Q96A23 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.91■□□□□ 0.78
CPNE4Q96A23 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.91■□□□□ 0.78
CPNE4Q96A23 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.91■□□□□ 0.78
CPNE4Q96A23 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.91■□□□□ 0.78
CPNE4Q96A23 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE4Q96A23 EDA-201ENST00000338901 1233 ntBASIC19.9■□□□□ 0.78
CPNE4Q96A23 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.9■□□□□ 0.78
CPNE4Q96A23 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CPNE4Q96A23 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE4Q96A23 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CPNE4Q96A23 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE4Q96A23 AC133637.1-201ENST00000624115 1537 ntBASIC19.9■□□□□ 0.78
CPNE4Q96A23 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CPNE4Q96A23 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE4Q96A23 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE4Q96A23 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE4Q96A23 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CPNE4Q96A23 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE4Q96A23 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE4Q96A23 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.89■□□□□ 0.77
CPNE4Q96A23 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE4Q96A23 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE4Q96A23 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.89■□□□□ 0.77
CPNE4Q96A23 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE4Q96A23 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE4Q96A23 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.89■□□□□ 0.77
CPNE4Q96A23 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE4Q96A23 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE4Q96A23 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE4Q96A23 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE4Q96A23 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE4Q96A23 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE4Q96A23 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE4Q96A23 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE4Q96A23 MIR638-201ENST00000385237 100 ntBASIC19.88■□□□□ 0.77
CPNE4Q96A23 MIR4767-201ENST00000582827 78 ntBASIC19.88■□□□□ 0.77
CPNE4Q96A23 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE4Q96A23 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE4Q96A23 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE4Q96A23 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE4Q96A23 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.87■□□□□ 0.77
CPNE4Q96A23 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE4Q96A23 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.87■□□□□ 0.77
CPNE4Q96A23 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.87■□□□□ 0.77
CPNE4Q96A23 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CPNE4Q96A23 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE4Q96A23 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE4Q96A23 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE4Q96A23 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE4Q96A23 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE4Q96A23 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 AL355001.2-201ENST00000620617 1191 ntBASIC19.86■□□□□ 0.77
CPNE4Q96A23 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE4Q96A23 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE4Q96A23 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CPNE4Q96A23 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.85■□□□□ 0.77
CPNE4Q96A23 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE4Q96A23 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CPNE4Q96A23 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.85■□□□□ 0.77
CPNE4Q96A23 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms