Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC28.81■■■□□ 2.2
SMARCC1Q92922 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC28.81■■■□□ 2.2
SMARCC1Q92922 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC28.81■■■□□ 2.2
SMARCC1Q92922 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC28.81■■■□□ 2.2
SMARCC1Q92922 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
SMARCC1Q92922 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCC1Q92922 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCC1Q92922 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
SMARCC1Q92922 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC28.8■■■□□ 2.2
SMARCC1Q92922 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC28.8■■■□□ 2.2
SMARCC1Q92922 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC28.8■■■□□ 2.2
SMARCC1Q92922 AC073111.5-205ENST00000641717 521 ntBASIC28.8■■■□□ 2.2
SMARCC1Q92922 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCC1Q92922 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.8■■■□□ 2.2
SMARCC1Q92922 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCC1Q92922 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SMARCC1Q92922 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.79■■■□□ 2.2
SMARCC1Q92922 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC28.79■■■□□ 2.2
SMARCC1Q92922 TPRG1LP1-201ENST00000598702 760 ntBASIC28.79■■■□□ 2.2
SMARCC1Q92922 LINC01529-204ENST00000636474 1715 ntBASIC28.79■■■□□ 2.2
SMARCC1Q92922 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
SMARCC1Q92922 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMARCC1Q92922 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SMARCC1Q92922 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMARCC1Q92922 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SMARCC1Q92922 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMARCC1Q92922 HSCB-202ENST00000398941 955 ntTSL 2 BASIC28.78■■■□□ 2.2
SMARCC1Q92922 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC28.78■■■□□ 2.2
SMARCC1Q92922 GXYLT1P5-201ENST00000614548 1189 ntBASIC28.78■■■□□ 2.2
SMARCC1Q92922 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMARCC1Q92922 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMARCC1Q92922 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMARCC1Q92922 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC28.77■■■□□ 2.2
SMARCC1Q92922 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SMARCC1Q92922 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SMARCC1Q92922 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC28.77■■■□□ 2.2
SMARCC1Q92922 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC28.77■■■□□ 2.2
SMARCC1Q92922 SHD-204ENST00000599689 1729 ntTSL 5 BASIC28.77■■■□□ 2.2
SMARCC1Q92922 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
SMARCC1Q92922 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
SMARCC1Q92922 AC144652.1-201ENST00000609974 1624 ntBASIC28.76■■■□□ 2.2
SMARCC1Q92922 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
SMARCC1Q92922 STX7-201ENST00000367937 1090 ntTSL 5 BASIC28.76■■■□□ 2.19
SMARCC1Q92922 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SMARCC1Q92922 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.76■■■□□ 2.19
SMARCC1Q92922 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
SMARCC1Q92922 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
SMARCC1Q92922 DBI-210ENST00000542275 757 ntTSL 5 BASIC28.75■■■□□ 2.19
SMARCC1Q92922 EMC9-206ENST00000560403 872 ntTSL 2 BASIC28.75■■■□□ 2.19
SMARCC1Q92922 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC28.75■■■□□ 2.19
SMARCC1Q92922 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC28.75■■■□□ 2.19
SMARCC1Q92922 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
SMARCC1Q92922 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SMARCC1Q92922 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.75■■■□□ 2.19
SMARCC1Q92922 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SMARCC1Q92922 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC28.75■■■□□ 2.19
SMARCC1Q92922 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SMARCC1Q92922 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.74■■■□□ 2.19
SMARCC1Q92922 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC28.74■■■□□ 2.19
SMARCC1Q92922 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
SMARCC1Q92922 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SMARCC1Q92922 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SMARCC1Q92922 AC026185.1-201ENST00000445748 174 ntBASIC28.74■■■□□ 2.19
SMARCC1Q92922 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SMARCC1Q92922 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.74■■■□□ 2.19
SMARCC1Q92922 AP004607.4-201ENST00000530158 1459 ntBASIC28.73■■■□□ 2.19
SMARCC1Q92922 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMARCC1Q92922 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMARCC1Q92922 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMARCC1Q92922 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMARCC1Q92922 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.73■■■□□ 2.19
SMARCC1Q92922 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.73■■■□□ 2.19
SMARCC1Q92922 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC28.73■■■□□ 2.19
SMARCC1Q92922 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SMARCC1Q92922 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SMARCC1Q92922 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SMARCC1Q92922 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SMARCC1Q92922 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.72■■■□□ 2.19
SMARCC1Q92922 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC28.72■■■□□ 2.19
SMARCC1Q92922 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC28.72■■■□□ 2.19
SMARCC1Q92922 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SMARCC1Q92922 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
SMARCC1Q92922 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMARCC1Q92922 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMARCC1Q92922 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SMARCC1Q92922 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMARCC1Q92922 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC28.71■■■□□ 2.19
SMARCC1Q92922 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SMARCC1Q92922 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC28.71■■■□□ 2.19
SMARCC1Q92922 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC28.7■■■□□ 2.19
SMARCC1Q92922 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
SMARCC1Q92922 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.7■■■□□ 2.19
SMARCC1Q92922 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SMARCC1Q92922 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SMARCC1Q92922 PPP1R14BP3-201ENST00000509033 445 ntBASIC28.7■■■□□ 2.18
SMARCC1Q92922 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC28.7■■■□□ 2.18
SMARCC1Q92922 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SMARCC1Q92922 BID-214ENST00000617586 542 ntTSL 5 BASIC28.7■■■□□ 2.18
SMARCC1Q92922 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC28.7■■■□□ 2.18
SMARCC1Q92922 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms