Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 AC242852.2-201ENST00000615738 1807 ntBASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCHCR1Q8TD31 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCHCR1Q8TD31 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CCHCR1Q8TD31 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCHCR1Q8TD31 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.06■■□□□ 1.28
CCHCR1Q8TD31 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.06■■□□□ 1.28
CCHCR1Q8TD31 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.06■■□□□ 1.28
CCHCR1Q8TD31 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.06■■□□□ 1.28
CCHCR1Q8TD31 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCHCR1Q8TD31 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCHCR1Q8TD31 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCHCR1Q8TD31 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 GUSBP5-201ENST00000418136 578 ntBASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCHCR1Q8TD31 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.03■■□□□ 1.28
CCHCR1Q8TD31 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 TSPY9P-201ENST00000440215 945 ntBASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 TSPY11P-201ENST00000442607 1045 ntBASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 SNX5-217ENST00000606557 1087 ntBASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCHCR1Q8TD31 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CCHCR1Q8TD31 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCHCR1Q8TD31 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCHCR1Q8TD31 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCHCR1Q8TD31 AL353803.4-201ENST00000565882 1934 ntBASIC23■■□□□ 1.27
CCHCR1Q8TD31 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms