Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.61■■■□□ 2.01
RTL9Q8NET4 AC034268.1-201ENST00000441047 882 ntBASIC27.6■■■□□ 2.01
RTL9Q8NET4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.6■■■□□ 2.01
RTL9Q8NET4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.6■■■□□ 2.01
RTL9Q8NET4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
RTL9Q8NET4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTL9Q8NET4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.6■■■□□ 2.01
RTL9Q8NET4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTL9Q8NET4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
RTL9Q8NET4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC27.6■■■□□ 2.01
RTL9Q8NET4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.6■■■□□ 2.01
RTL9Q8NET4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTL9Q8NET4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTL9Q8NET4 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.6■■■□□ 2.01
RTL9Q8NET4 KRT18P5-201ENST00000436075 1291 ntBASIC27.6■■■□□ 2.01
RTL9Q8NET4 AC022517.1-201ENST00000592429 346 ntBASIC27.6■■■□□ 2.01
RTL9Q8NET4 AL354811.1-201ENST00000610286 706 ntBASIC27.6■■■□□ 2.01
RTL9Q8NET4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.6■■■□□ 2.01
RTL9Q8NET4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.59■■■□□ 2.01
RTL9Q8NET4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTL9Q8NET4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.59■■■□□ 2.01
RTL9Q8NET4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RTL9Q8NET4 AC123595.1-201ENST00000440769 1046 ntBASIC27.59■■■□□ 2.01
RTL9Q8NET4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RTL9Q8NET4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC27.59■■■□□ 2.01
RTL9Q8NET4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.59■■■□□ 2.01
RTL9Q8NET4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTL9Q8NET4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RTL9Q8NET4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC27.59■■■□□ 2.01
RTL9Q8NET4 AC092437.1-201ENST00000624794 1048 ntBASIC27.59■■■□□ 2.01
RTL9Q8NET4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTL9Q8NET4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.58■■■□□ 2.01
RTL9Q8NET4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTL9Q8NET4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTL9Q8NET4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTL9Q8NET4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
RTL9Q8NET4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
RTL9Q8NET4 AC079630.1-202ENST00000618127 1840 ntBASIC27.58■■■□□ 2.01
RTL9Q8NET4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTL9Q8NET4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC27.58■■■□□ 2.01
RTL9Q8NET4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.58■■■□□ 2.01
RTL9Q8NET4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTL9Q8NET4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.58■■■□□ 2
RTL9Q8NET4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
RTL9Q8NET4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.57■■■□□ 2
RTL9Q8NET4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RTL9Q8NET4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
RTL9Q8NET4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
RTL9Q8NET4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
RTL9Q8NET4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RTL9Q8NET4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RTL9Q8NET4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.57■■■□□ 2
RTL9Q8NET4 DUX4L2-201ENST00000561772 1275 ntBASIC27.57■■■□□ 2
RTL9Q8NET4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.57■■■□□ 2
RTL9Q8NET4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.57■■■□□ 2
RTL9Q8NET4 DUX4L6-201ENST00000626483 1275 ntBASIC27.57■■■□□ 2
RTL9Q8NET4 DUX4L1-201ENST00000627662 1275 ntBASIC27.57■■■□□ 2
RTL9Q8NET4 DUX4L8-201ENST00000629013 1275 ntBASIC27.57■■■□□ 2
RTL9Q8NET4 DUX4L3-201ENST00000630187 1275 ntBASIC27.57■■■□□ 2
RTL9Q8NET4 DUX4L7-201ENST00000630678 1275 ntBASIC27.57■■■□□ 2
RTL9Q8NET4 DUX4L5-201ENST00000630834 1275 ntBASIC27.57■■■□□ 2
RTL9Q8NET4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTL9Q8NET4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC27.56■■■□□ 2
RTL9Q8NET4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTL9Q8NET4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC27.56■■■□□ 2
RTL9Q8NET4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.56■■■□□ 2
RTL9Q8NET4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.56■■■□□ 2
RTL9Q8NET4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.56■■■□□ 2
RTL9Q8NET4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.56■■■□□ 2
RTL9Q8NET4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTL9Q8NET4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTL9Q8NET4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.56■■■□□ 2
RTL9Q8NET4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTL9Q8NET4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.55■■■□□ 2
RTL9Q8NET4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC27.55■■■□□ 2
RTL9Q8NET4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
RTL9Q8NET4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC27.55■■■□□ 2
RTL9Q8NET4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.55■■■□□ 2
RTL9Q8NET4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTL9Q8NET4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
RTL9Q8NET4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.55■■■□□ 2
RTL9Q8NET4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RTL9Q8NET4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.54■■■□□ 2
RTL9Q8NET4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.54■■■□□ 2
RTL9Q8NET4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC27.54■■■□□ 2
RTL9Q8NET4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC27.54■■■□□ 2
RTL9Q8NET4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RTL9Q8NET4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.53■■■□□ 2
RTL9Q8NET4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.53■■■□□ 2
RTL9Q8NET4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.53■■■□□ 2
RTL9Q8NET4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RTL9Q8NET4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RTL9Q8NET4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC27.53■■■□□ 2
RTL9Q8NET4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
RTL9Q8NET4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
RTL9Q8NET4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.52■■■□□ 2
RTL9Q8NET4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC27.52■■■□□ 2
RTL9Q8NET4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
RTL9Q8NET4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RTL9Q8NET4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.52■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms