Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 PKD1P6-201ENST00000343738 4769 ntBASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 AC079630.1-202ENST00000618127 1840 ntBASIC19.48■□□□□ 0.71
DNAAF1Q8NEP3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DNAAF1Q8NEP3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DNAAF1Q8NEP3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DNAAF1Q8NEP3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DNAAF1Q8NEP3 PVT1_1.1-201ENST00000615125 194 ntBASIC19.48■□□□□ 0.71
DNAAF1Q8NEP3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.48■□□□□ 0.71
DNAAF1Q8NEP3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.48■□□□□ 0.71
DNAAF1Q8NEP3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 AC242852.2-201ENST00000615738 1807 ntBASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 MIR4281-201ENST00000580852 62 ntBASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DNAAF1Q8NEP3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF1Q8NEP3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF1Q8NEP3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF1Q8NEP3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF1Q8NEP3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.46■□□□□ 0.71
DNAAF1Q8NEP3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.46■□□□□ 0.71
DNAAF1Q8NEP3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DNAAF1Q8NEP3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
DNAAF1Q8NEP3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF1Q8NEP3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DNAAF1Q8NEP3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 AF131216.4-201ENST00000638924 1588 ntBASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 MIR4508-201ENST00000584178 70 ntBASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 AC010980.1-201ENST00000587192 1142 ntBASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 AC012354.3-201ENST00000623734 483 ntBASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.45■□□□□ 0.7
DNAAF1Q8NEP3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAAF1Q8NEP3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DNAAF1Q8NEP3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DNAAF1Q8NEP3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.43■□□□□ 0.7
DNAAF1Q8NEP3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DNAAF1Q8NEP3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 AC004448.1-201ENST00000458332 883 ntBASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNAAF1Q8NEP3 ESRRAP2-201ENST00000418437 1549 ntBASIC19.41■□□□□ 0.7
DNAAF1Q8NEP3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms