Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 OR2I1P-207ENST00000453522 948 ntBASIC21.05■□□□□ 0.96
SLC38A9Q8NBW4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SLC38A9Q8NBW4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC38A9Q8NBW4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC38A9Q8NBW4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC38A9Q8NBW4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC38A9Q8NBW4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SLC38A9Q8NBW4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC38A9Q8NBW4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 IGHV3-19-201ENST00000521488 291 ntBASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC38A9Q8NBW4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC38A9Q8NBW4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC38A9Q8NBW4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC38A9Q8NBW4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC38A9Q8NBW4 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC38A9Q8NBW4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC38A9Q8NBW4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 AL162430.1-201ENST00000480705 870 ntBASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC38A9Q8NBW4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC38A9Q8NBW4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC38A9Q8NBW4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 AC104564.3-201ENST00000582367 638 ntBASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC38A9Q8NBW4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 MIR572-201ENST00000384983 95 ntBASIC21■□□□□ 0.95
SLC38A9Q8NBW4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC38A9Q8NBW4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 AL031602.1-201ENST00000633169 911 ntBASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC38A9Q8NBW4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 AL353803.4-201ENST00000565882 1934 ntBASIC20.98■□□□□ 0.95
SLC38A9Q8NBW4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms