Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 pRNA.11-201ENST00000618423 90 ntBASIC19.74■□□□□ 0.75
ZIC4Q8N9L1 pRNA.13-201ENST00000619112 90 ntBASIC19.74■□□□□ 0.75
ZIC4Q8N9L1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.74■□□□□ 0.75
ZIC4Q8N9L1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZIC4Q8N9L1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZIC4Q8N9L1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZIC4Q8N9L1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.74■□□□□ 0.75
ZIC4Q8N9L1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
ZIC4Q8N9L1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 DUX4L19-201ENST00000557448 1267 ntBASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 C9orf163-202ENST00000624034 2573 ntBASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZIC4Q8N9L1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 SYT6-210ENST00000641643 1587 ntBASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.72■□□□□ 0.75
ZIC4Q8N9L1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.71■□□□□ 0.75
ZIC4Q8N9L1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZIC4Q8N9L1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.71■□□□□ 0.75
ZIC4Q8N9L1 UNC93B3-201ENST00000308076 687 ntBASIC19.71■□□□□ 0.75
ZIC4Q8N9L1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZIC4Q8N9L1 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.71■□□□□ 0.75
ZIC4Q8N9L1 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.71■□□□□ 0.75
ZIC4Q8N9L1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZIC4Q8N9L1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.71■□□□□ 0.75
ZIC4Q8N9L1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZIC4Q8N9L1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZIC4Q8N9L1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC4Q8N9L1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC4Q8N9L1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC4Q8N9L1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC4Q8N9L1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.7■□□□□ 0.74
ZIC4Q8N9L1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.7■□□□□ 0.74
ZIC4Q8N9L1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZIC4Q8N9L1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.7■□□□□ 0.74
ZIC4Q8N9L1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 AC096631.2-201ENST00000436136 790 ntBASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 AL138724.1-201ENST00000606771 1088 ntBASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 AC133637.1-201ENST00000624115 1537 ntBASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ZIC4Q8N9L1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ZIC4Q8N9L1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.67■□□□□ 0.74
ZIC4Q8N9L1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 AC004687.1-201ENST00000579003 1625 ntBASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms