Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
C3orf56Q8N813 AL161729.1-201ENST00000604104 1402 ntBASIC17.41■□□□□ 0.38
C3orf56Q8N813 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
C3orf56Q8N813 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C3orf56Q8N813 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C3orf56Q8N813 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C3orf56Q8N813 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C3orf56Q8N813 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
C3orf56Q8N813 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C3orf56Q8N813 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C3orf56Q8N813 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C3orf56Q8N813 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.4■□□□□ 0.38
C3orf56Q8N813 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C3orf56Q8N813 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.4■□□□□ 0.38
C3orf56Q8N813 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.4■□□□□ 0.38
C3orf56Q8N813 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.4■□□□□ 0.38
C3orf56Q8N813 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C3orf56Q8N813 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.4■□□□□ 0.38
C3orf56Q8N813 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
C3orf56Q8N813 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C3orf56Q8N813 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.4■□□□□ 0.38
C3orf56Q8N813 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
C3orf56Q8N813 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
C3orf56Q8N813 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.39■□□□□ 0.37
C3orf56Q8N813 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
C3orf56Q8N813 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C3orf56Q8N813 FAM201B-201ENST00000458407 597 ntBASIC17.39■□□□□ 0.37
C3orf56Q8N813 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.39■□□□□ 0.37
C3orf56Q8N813 KRT18P61-201ENST00000585825 1298 ntBASIC17.39■□□□□ 0.37
C3orf56Q8N813 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.39■□□□□ 0.37
C3orf56Q8N813 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.39■□□□□ 0.37
C3orf56Q8N813 AC011767.1-201ENST00000617410 1153 ntBASIC17.39■□□□□ 0.37
C3orf56Q8N813 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.39■□□□□ 0.37
C3orf56Q8N813 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C3orf56Q8N813 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C3orf56Q8N813 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C3orf56Q8N813 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
C3orf56Q8N813 AC004854.2-201ENST00000608450 1441 ntBASIC17.38■□□□□ 0.37
C3orf56Q8N813 AP004607.4-201ENST00000530158 1459 ntBASIC17.38■□□□□ 0.37
C3orf56Q8N813 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.38■□□□□ 0.37
C3orf56Q8N813 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C3orf56Q8N813 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C3orf56Q8N813 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C3orf56Q8N813 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
C3orf56Q8N813 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
C3orf56Q8N813 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C3orf56Q8N813 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.38■□□□□ 0.37
C3orf56Q8N813 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
C3orf56Q8N813 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.38■□□□□ 0.37
C3orf56Q8N813 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.38■□□□□ 0.37
C3orf56Q8N813 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C3orf56Q8N813 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C3orf56Q8N813 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.38■□□□□ 0.37
C3orf56Q8N813 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C3orf56Q8N813 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
C3orf56Q8N813 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
C3orf56Q8N813 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
C3orf56Q8N813 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.37■□□□□ 0.37
C3orf56Q8N813 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C3orf56Q8N813 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.37■□□□□ 0.37
C3orf56Q8N813 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.37■□□□□ 0.37
C3orf56Q8N813 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.37■□□□□ 0.37
C3orf56Q8N813 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C3orf56Q8N813 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
C3orf56Q8N813 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.37■□□□□ 0.37
C3orf56Q8N813 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.37■□□□□ 0.37
C3orf56Q8N813 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C3orf56Q8N813 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
C3orf56Q8N813 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C3orf56Q8N813 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C3orf56Q8N813 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C3orf56Q8N813 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C3orf56Q8N813 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.36■□□□□ 0.37
C3orf56Q8N813 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.36■□□□□ 0.37
C3orf56Q8N813 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
C3orf56Q8N813 MIR6089-201ENST00000616698 64 ntBASIC17.36■□□□□ 0.37
C3orf56Q8N813 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C3orf56Q8N813 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C3orf56Q8N813 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.36■□□□□ 0.37
C3orf56Q8N813 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C3orf56Q8N813 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C3orf56Q8N813 ALDH1A3-203ENST00000557963 1670 ntBASIC17.36■□□□□ 0.37
C3orf56Q8N813 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.35■□□□□ 0.37
C3orf56Q8N813 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C3orf56Q8N813 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C3orf56Q8N813 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C3orf56Q8N813 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.35■□□□□ 0.37
C3orf56Q8N813 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.35■□□□□ 0.37
C3orf56Q8N813 KRT18P6-201ENST00000555540 1265 ntBASIC17.35■□□□□ 0.37
C3orf56Q8N813 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.35■□□□□ 0.37
C3orf56Q8N813 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.35■□□□□ 0.37
C3orf56Q8N813 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.35■□□□□ 0.37
C3orf56Q8N813 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.35■□□□□ 0.37
C3orf56Q8N813 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C3orf56Q8N813 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C3orf56Q8N813 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.35■□□□□ 0.37
C3orf56Q8N813 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C3orf56Q8N813 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C3orf56Q8N813 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C3orf56Q8N813 SLC6A10P-202ENST00000431994 2058 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms