Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 LINC01529-204ENST00000636474 1715 ntBASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH20Q8N6Y1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDH20Q8N6Y1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
PCDH20Q8N6Y1 AL031432.3-201ENST00000607698 485 ntBASIC22.67■■□□□ 1.22
PCDH20Q8N6Y1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH20Q8N6Y1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
PCDH20Q8N6Y1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDH20Q8N6Y1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 AL499627.2-201ENST00000606283 725 ntBASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH20Q8N6Y1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH20Q8N6Y1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH20Q8N6Y1 AC079630.1-202ENST00000618127 1840 ntBASIC22.64■■□□□ 1.22
PCDH20Q8N6Y1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.64■■□□□ 1.22
PCDH20Q8N6Y1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 SUDS3P1-201ENST00000505831 966 ntBASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 AC142381.2-201ENST00000566120 298 ntBASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH20Q8N6Y1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
PCDH20Q8N6Y1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.62■■□□□ 1.21
PCDH20Q8N6Y1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 AP001330.3-201ENST00000520123 633 ntBASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDH20Q8N6Y1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms