Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 AC096631.2-201ENST00000436136 790 ntBASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC29.53■■■□□ 2.32
CCDC146Q8IYE0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCDC146Q8IYE0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC29.52■■■□□ 2.32
CCDC146Q8IYE0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCDC146Q8IYE0 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.52■■■□□ 2.32
CCDC146Q8IYE0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.52■■■□□ 2.32
CCDC146Q8IYE0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.52■■■□□ 2.32
CCDC146Q8IYE0 MIR3181-201ENST00000578512 73 ntBASIC29.52■■■□□ 2.32
CCDC146Q8IYE0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
CCDC146Q8IYE0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC29.51■■■□□ 2.31
CCDC146Q8IYE0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCDC146Q8IYE0 UNC93B3-201ENST00000308076 687 ntBASIC29.51■■■□□ 2.31
CCDC146Q8IYE0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
CCDC146Q8IYE0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC29.51■■■□□ 2.31
CCDC146Q8IYE0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCDC146Q8IYE0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.51■■■□□ 2.31
CCDC146Q8IYE0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CCDC146Q8IYE0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC29.5■■■□□ 2.31
CCDC146Q8IYE0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC146Q8IYE0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC146Q8IYE0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC29.5■■■□□ 2.31
CCDC146Q8IYE0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.5■■■□□ 2.31
CCDC146Q8IYE0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC29.5■■■□□ 2.31
CCDC146Q8IYE0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.5■■■□□ 2.31
CCDC146Q8IYE0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC146Q8IYE0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC146Q8IYE0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
CCDC146Q8IYE0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC29.49■■■□□ 2.31
CCDC146Q8IYE0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC29.49■■■□□ 2.31
CCDC146Q8IYE0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC146Q8IYE0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC146Q8IYE0 AC110285.6-201ENST00000617652 491 ntBASIC29.49■■■□□ 2.31
CCDC146Q8IYE0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 SYT6-210ENST00000641643 1587 ntBASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC146Q8IYE0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC146Q8IYE0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC146Q8IYE0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC146Q8IYE0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC29.47■■■□□ 2.31
CCDC146Q8IYE0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC29.46■■■□□ 2.31
CCDC146Q8IYE0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC146Q8IYE0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.46■■■□□ 2.31
CCDC146Q8IYE0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC146Q8IYE0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
CCDC146Q8IYE0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC146Q8IYE0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC29.46■■■□□ 2.31
CCDC146Q8IYE0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC29.45■■■□□ 2.31
CCDC146Q8IYE0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC29.45■■■□□ 2.31
CCDC146Q8IYE0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
CCDC146Q8IYE0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC29.45■■■□□ 2.31
CCDC146Q8IYE0 AC004687.1-201ENST00000579003 1625 ntBASIC29.45■■■□□ 2.3
CCDC146Q8IYE0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CCDC146Q8IYE0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 AL499627.2-201ENST00000606283 725 ntBASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC29.44■■■□□ 2.3
CCDC146Q8IYE0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 AC024257.2-201ENST00000549699 147 ntBASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 AL136162.1-201ENST00000607711 1078 ntBASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC146Q8IYE0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC146Q8IYE0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms