Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ZC3H3Q8IXZ2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ZC3H3Q8IXZ2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ZC3H3Q8IXZ2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 AC087742.1-201ENST00000575880 1738 ntBASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 GUSBP5-202ENST00000510805 1989 ntBASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZC3H3Q8IXZ2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 AL117332.1-201ENST00000622628 974 ntBASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 AC009086.3-201ENST00000623486 1008 ntBASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H3Q8IXZ2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 ECEL1P1-201ENST00000373592 1742 ntBASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H3Q8IXZ2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 MIR3621-201ENST00000580529 85 ntBASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H3Q8IXZ2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H3Q8IXZ2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H3Q8IXZ2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.23■■□□□ 1.47
ZC3H3Q8IXZ2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
ZC3H3Q8IXZ2 AL499627.2-201ENST00000606283 725 ntBASIC24.23■■□□□ 1.47
ZC3H3Q8IXZ2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H3Q8IXZ2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H3Q8IXZ2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.22■■□□□ 1.47
ZC3H3Q8IXZ2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
ZC3H3Q8IXZ2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H3Q8IXZ2 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.22■■□□□ 1.47
ZC3H3Q8IXZ2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H3Q8IXZ2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H3Q8IXZ2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H3Q8IXZ2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.21■■□□□ 1.47
ZC3H3Q8IXZ2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H3Q8IXZ2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
ZC3H3Q8IXZ2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H3Q8IXZ2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H3Q8IXZ2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H3Q8IXZ2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ZC3H3Q8IXZ2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ZC3H3Q8IXZ2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ZC3H3Q8IXZ2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.2■■□□□ 1.46
ZC3H3Q8IXZ2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ZC3H3Q8IXZ2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
ZC3H3Q8IXZ2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.2■■□□□ 1.46
ZC3H3Q8IXZ2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
ZC3H3Q8IXZ2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.2■■□□□ 1.46
ZC3H3Q8IXZ2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
ZC3H3Q8IXZ2 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.19■■□□□ 1.46
ZC3H3Q8IXZ2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms