Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.85■■□□□ 1.57
CCDC60Q8IWA6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.85■■□□□ 1.57
CCDC60Q8IWA6 RARRES2P6-201ENST00000567333 442 ntBASIC24.85■■□□□ 1.57
CCDC60Q8IWA6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
CCDC60Q8IWA6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCDC60Q8IWA6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CCDC60Q8IWA6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CCDC60Q8IWA6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC60Q8IWA6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.84■■□□□ 1.57
CCDC60Q8IWA6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC60Q8IWA6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC60Q8IWA6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC60Q8IWA6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CCDC60Q8IWA6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.83■■□□□ 1.57
CCDC60Q8IWA6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC60Q8IWA6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC60Q8IWA6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CCDC60Q8IWA6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CCDC60Q8IWA6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC60Q8IWA6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC60Q8IWA6 AC026271.2-201ENST00000428091 497 ntBASIC24.83■■□□□ 1.57
CCDC60Q8IWA6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
CCDC60Q8IWA6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC60Q8IWA6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC60Q8IWA6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC60Q8IWA6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC60Q8IWA6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.82■■□□□ 1.56
CCDC60Q8IWA6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
CCDC60Q8IWA6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CCDC60Q8IWA6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.81■■□□□ 1.56
CCDC60Q8IWA6 IRS3P-201ENST00000223076 1006 ntBASIC24.81■■□□□ 1.56
CCDC60Q8IWA6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CCDC60Q8IWA6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CCDC60Q8IWA6 TSPY26P-201ENST00000476365 1326 ntBASIC24.81■■□□□ 1.56
CCDC60Q8IWA6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCDC60Q8IWA6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCDC60Q8IWA6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CCDC60Q8IWA6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.8■■□□□ 1.56
CCDC60Q8IWA6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
CCDC60Q8IWA6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC60Q8IWA6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC60Q8IWA6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.8■■□□□ 1.56
CCDC60Q8IWA6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.8■■□□□ 1.56
CCDC60Q8IWA6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC60Q8IWA6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
CCDC60Q8IWA6 AC093323.1-202ENST00000635031 2045 ntBASIC24.79■■□□□ 1.56
CCDC60Q8IWA6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC60Q8IWA6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC60Q8IWA6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.79■■□□□ 1.56
CCDC60Q8IWA6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.79■■□□□ 1.56
CCDC60Q8IWA6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC60Q8IWA6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.79■■□□□ 1.56
CCDC60Q8IWA6 ANOS2P-203ENST00000472227 1816 ntBASIC24.79■■□□□ 1.56
CCDC60Q8IWA6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 IGHV3-19-201ENST00000521488 291 ntBASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 AC004687.1-201ENST00000579003 1625 ntBASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
CCDC60Q8IWA6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC60Q8IWA6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.77■■□□□ 1.56
CCDC60Q8IWA6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC60Q8IWA6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
CCDC60Q8IWA6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.77■■□□□ 1.56
CCDC60Q8IWA6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC60Q8IWA6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
CCDC60Q8IWA6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.77■■□□□ 1.56
CCDC60Q8IWA6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC60Q8IWA6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CCDC60Q8IWA6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC60Q8IWA6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
CCDC60Q8IWA6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
CCDC60Q8IWA6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC60Q8IWA6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC60Q8IWA6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC60Q8IWA6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
CCDC60Q8IWA6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCDC60Q8IWA6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CCDC60Q8IWA6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.75■■□□□ 1.55
CCDC60Q8IWA6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms