Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC190Q86UF4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC190Q86UF4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC190Q86UF4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC190Q86UF4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC190Q86UF4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC190Q86UF4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC190Q86UF4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC190Q86UF4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC190Q86UF4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
CCDC190Q86UF4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC190Q86UF4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC190Q86UF4 AC007952.6-201ENST00000573168 2673 ntBASIC19.36■□□□□ 0.69
CCDC190Q86UF4 AC003957.1-201ENST00000625108 2673 ntBASIC19.36■□□□□ 0.69
CCDC190Q86UF4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC190Q86UF4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC190Q86UF4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CCDC190Q86UF4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC190Q86UF4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC190Q86UF4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC190Q86UF4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 ALDH1A3-203ENST00000557963 1670 ntBASIC19.34■□□□□ 0.69
CCDC190Q86UF4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 AL157400.5-201ENST00000507624 621 ntBASIC19.34■□□□□ 0.69
CCDC190Q86UF4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 AC244015.2-201ENST00000616358 1861 ntBASIC19.34■□□□□ 0.69
CCDC190Q86UF4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 AC090877.2-201ENST00000558441 1738 ntBASIC19.34■□□□□ 0.69
CCDC190Q86UF4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC190Q86UF4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CCDC190Q86UF4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC190Q86UF4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC190Q86UF4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CCDC190Q86UF4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC190Q86UF4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC190Q86UF4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC190Q86UF4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC190Q86UF4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms