Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.22■■□□□ 1.31
DENND4AQ7Z401 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.22■■□□□ 1.31
DENND4AQ7Z401 AC104771.1-201ENST00000603335 964 ntBASIC23.22■■□□□ 1.31
DENND4AQ7Z401 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.22■■□□□ 1.31
DENND4AQ7Z401 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.21■■□□□ 1.31
DENND4AQ7Z401 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND4AQ7Z401 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND4AQ7Z401 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND4AQ7Z401 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.21■■□□□ 1.31
DENND4AQ7Z401 CDCA4P2-201ENST00000441182 718 ntBASIC23.21■■□□□ 1.31
DENND4AQ7Z401 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.21■■□□□ 1.31
DENND4AQ7Z401 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
DENND4AQ7Z401 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.21■■□□□ 1.31
DENND4AQ7Z401 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND4AQ7Z401 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DENND4AQ7Z401 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.2■■□□□ 1.3
DENND4AQ7Z401 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.2■■□□□ 1.3
DENND4AQ7Z401 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
DENND4AQ7Z401 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.2■■□□□ 1.3
DENND4AQ7Z401 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DENND4AQ7Z401 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
DENND4AQ7Z401 LINC02228-203ENST00000641970 1355 ntBASIC23.2■■□□□ 1.3
DENND4AQ7Z401 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
DENND4AQ7Z401 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 FP325331.1-202ENST00000623531 1380 ntBASIC23.19■■□□□ 1.3
DENND4AQ7Z401 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 AC105233.4-201ENST00000642045 216 ntBASIC23.19■■□□□ 1.3
DENND4AQ7Z401 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DENND4AQ7Z401 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DENND4AQ7Z401 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DENND4AQ7Z401 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
DENND4AQ7Z401 MIR663A-201ENST00000385250 93 ntBASIC23.18■■□□□ 1.3
DENND4AQ7Z401 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
DENND4AQ7Z401 AC026185.1-201ENST00000445748 174 ntBASIC23.18■■□□□ 1.3
DENND4AQ7Z401 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.18■■□□□ 1.3
DENND4AQ7Z401 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DENND4AQ7Z401 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DENND4AQ7Z401 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.17■■□□□ 1.3
DENND4AQ7Z401 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.17■■□□□ 1.3
DENND4AQ7Z401 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 DUX4L4-201ENST00000566884 1269 ntBASIC23.17■■□□□ 1.3
DENND4AQ7Z401 AC080038.1-201ENST00000611274 1154 ntBASIC23.17■■□□□ 1.3
DENND4AQ7Z401 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.17■■□□□ 1.3
DENND4AQ7Z401 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DENND4AQ7Z401 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DENND4AQ7Z401 AC144652.1-201ENST00000609974 1624 ntBASIC23.14■■□□□ 1.3
DENND4AQ7Z401 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.14■■□□□ 1.3
DENND4AQ7Z401 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.14■■□□□ 1.3
DENND4AQ7Z401 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
DENND4AQ7Z401 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.14■■□□□ 1.29
DENND4AQ7Z401 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.14■■□□□ 1.29
DENND4AQ7Z401 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
DENND4AQ7Z401 AP004607.4-201ENST00000530158 1459 ntBASIC23.14■■□□□ 1.29
DENND4AQ7Z401 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DENND4AQ7Z401 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DENND4AQ7Z401 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.13■■□□□ 1.29
DENND4AQ7Z401 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.13■■□□□ 1.29
DENND4AQ7Z401 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DENND4AQ7Z401 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms