Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBA1AQ71U36 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 AC239859.2-201ENST00000444165 318 ntBASIC20.36■□□□□ 0.85
TUBA1AQ71U36 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TUBA1AQ71U36 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBA1AQ71U36 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBA1AQ71U36 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TUBA1AQ71U36 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TUBA1AQ71U36 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TUBA1AQ71U36 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBA1AQ71U36 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.35■□□□□ 0.85
TUBA1AQ71U36 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.35■□□□□ 0.85
TUBA1AQ71U36 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TUBA1AQ71U36 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TUBA1AQ71U36 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TUBA1AQ71U36 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TUBA1AQ71U36 BX664725.1-201ENST00000438252 379 ntBASIC20.34■□□□□ 0.85
TUBA1AQ71U36 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TUBA1AQ71U36 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TUBA1AQ71U36 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TUBA1AQ71U36 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TUBA1AQ71U36 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TUBA1AQ71U36 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TUBA1AQ71U36 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TUBA1AQ71U36 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.33■□□□□ 0.85
TUBA1AQ71U36 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.33■□□□□ 0.85
TUBA1AQ71U36 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.33■□□□□ 0.85
TUBA1AQ71U36 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TUBA1AQ71U36 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TUBA1AQ71U36 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 AF131216.4-201ENST00000638924 1588 ntBASIC20.32■□□□□ 0.84
TUBA1AQ71U36 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TUBA1AQ71U36 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 AC137630.3-201ENST00000607245 391 ntBASIC20.31■□□□□ 0.84
TUBA1AQ71U36 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.31■□□□□ 0.84
TUBA1AQ71U36 ESRRAP2-201ENST00000418437 1549 ntBASIC20.31■□□□□ 0.84
TUBA1AQ71U36 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms