Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 C17orf82-201ENST00000623772 1530 ntBASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 MIR3621-201ENST00000580529 85 ntBASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NHLRC1Q6VVB1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NHLRC1Q6VVB1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.92■□□□□ 0.78
NHLRC1Q6VVB1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.92■□□□□ 0.78
NHLRC1Q6VVB1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NHLRC1Q6VVB1 AL117332.1-201ENST00000622628 974 ntBASIC19.92■□□□□ 0.78
NHLRC1Q6VVB1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NHLRC1Q6VVB1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NHLRC1Q6VVB1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.92■□□□□ 0.78
NHLRC1Q6VVB1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 AL356441.2-201ENST00000443009 864 ntBASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NHLRC1Q6VVB1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NHLRC1Q6VVB1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.9■□□□□ 0.78
NHLRC1Q6VVB1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.9■□□□□ 0.78
NHLRC1Q6VVB1 DUX4L4-201ENST00000566884 1269 ntBASIC19.9■□□□□ 0.78
NHLRC1Q6VVB1 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.9■□□□□ 0.78
NHLRC1Q6VVB1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NHLRC1Q6VVB1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NHLRC1Q6VVB1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.9■□□□□ 0.78
NHLRC1Q6VVB1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NHLRC1Q6VVB1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NHLRC1Q6VVB1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NHLRC1Q6VVB1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.89■□□□□ 0.77
NHLRC1Q6VVB1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NHLRC1Q6VVB1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.89■□□□□ 0.77
NHLRC1Q6VVB1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.89■□□□□ 0.77
NHLRC1Q6VVB1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.89■□□□□ 0.77
NHLRC1Q6VVB1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.89■□□□□ 0.77
NHLRC1Q6VVB1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NHLRC1Q6VVB1 LINC01529-204ENST00000636474 1715 ntBASIC19.89■□□□□ 0.77
NHLRC1Q6VVB1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NHLRC1Q6VVB1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NHLRC1Q6VVB1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NHLRC1Q6VVB1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NHLRC1Q6VVB1 AL356740.2-201ENST00000601559 647 ntBASIC19.86■□□□□ 0.77
NHLRC1Q6VVB1 AL512631.2-201ENST00000604634 923 ntBASIC19.86■□□□□ 0.77
NHLRC1Q6VVB1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.86■□□□□ 0.77
NHLRC1Q6VVB1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms