Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 OR2I1P-207ENST00000453522 948 ntBASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
H3F3CQ6NXT2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H3F3CQ6NXT2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H3F3CQ6NXT2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
H3F3CQ6NXT2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.56■□□□□ 0.88
H3F3CQ6NXT2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.56■□□□□ 0.88
H3F3CQ6NXT2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H3F3CQ6NXT2 AC126544.1-201ENST00000580842 1059 ntBASIC20.56■□□□□ 0.88
H3F3CQ6NXT2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H3F3CQ6NXT2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H3F3CQ6NXT2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
H3F3CQ6NXT2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H3F3CQ6NXT2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.55■□□□□ 0.88
H3F3CQ6NXT2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.55■□□□□ 0.88
H3F3CQ6NXT2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
H3F3CQ6NXT2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
H3F3CQ6NXT2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.55■□□□□ 0.88
H3F3CQ6NXT2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
H3F3CQ6NXT2 MIR6821-201ENST00000617625 74 ntBASIC20.55■□□□□ 0.88
H3F3CQ6NXT2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
H3F3CQ6NXT2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
H3F3CQ6NXT2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3F3CQ6NXT2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
H3F3CQ6NXT2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.54■□□□□ 0.88
H3F3CQ6NXT2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3F3CQ6NXT2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
H3F3CQ6NXT2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.54■□□□□ 0.88
H3F3CQ6NXT2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
H3F3CQ6NXT2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.54■□□□□ 0.88
H3F3CQ6NXT2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 AC097381.1-201ENST00000429019 1296 ntBASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H3F3CQ6NXT2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 AC079630.1-202ENST00000618127 1840 ntBASIC20.52■□□□□ 0.88
H3F3CQ6NXT2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
H3F3CQ6NXT2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 IGHV3-19-201ENST00000521488 291 ntBASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.51■□□□□ 0.87
H3F3CQ6NXT2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.5■□□□□ 0.87
H3F3CQ6NXT2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
H3F3CQ6NXT2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
H3F3CQ6NXT2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.5■□□□□ 0.87
H3F3CQ6NXT2 AC010525.1-201ENST00000585559 441 ntBASIC20.5■□□□□ 0.87
H3F3CQ6NXT2 TSPY26P-201ENST00000476365 1326 ntBASIC20.5■□□□□ 0.87
H3F3CQ6NXT2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.5■□□□□ 0.87
H3F3CQ6NXT2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
H3F3CQ6NXT2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms