Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 AC007322.1-201ENST00000426983 750 ntBASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 AL158047.1-201ENST00000445918 881 ntBASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H2BCQ6DN03 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HIST2H2BCQ6DN03 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST2H2BCQ6DN03 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HIST2H2BCQ6DN03 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HIST2H2BCQ6DN03 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HIST2H2BCQ6DN03 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H2BCQ6DN03 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.33■□□□□ 0.68
HIST2H2BCQ6DN03 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.33■□□□□ 0.68
HIST2H2BCQ6DN03 SLC7A5P1-201ENST00000568957 537 ntBASIC19.33■□□□□ 0.68
HIST2H2BCQ6DN03 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H2BCQ6DN03 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H2BCQ6DN03 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H2BCQ6DN03 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 RPS2P4-201ENST00000476944 856 ntBASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 DUX4L16-201ENST00000555130 1264 ntBASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H2BCQ6DN03 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2BCQ6DN03 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 GCSHP5-201ENST00000443090 522 ntBASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 AC231657.2-201ENST00000624556 255 ntBASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2BCQ6DN03 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 AC105036.2-201ENST00000569468 176 ntBASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2BCQ6DN03 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
HIST2H2BCQ6DN03 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.27■□□□□ 0.68
HIST2H2BCQ6DN03 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms