Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SEL1L3Q68CR1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SEL1L3Q68CR1 MIR4767-201ENST00000582827 78 ntBASIC22.58■■□□□ 1.21
SEL1L3Q68CR1 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.58■■□□□ 1.21
SEL1L3Q68CR1 AL355001.2-201ENST00000620617 1191 ntBASIC22.58■■□□□ 1.21
SEL1L3Q68CR1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
SEL1L3Q68CR1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SEL1L3Q68CR1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SEL1L3Q68CR1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SEL1L3Q68CR1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SEL1L3Q68CR1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.57■■□□□ 1.2
SEL1L3Q68CR1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.57■■□□□ 1.2
SEL1L3Q68CR1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SEL1L3Q68CR1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SEL1L3Q68CR1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SEL1L3Q68CR1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SEL1L3Q68CR1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 ZNRF2P3-201ENST00000424200 374 ntBASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 AC241377.3-202ENST00000626088 1088 ntBASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 AC241585.3-202ENST00000628937 1088 ntBASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 AC245100.8-202ENST00000629247 1058 ntBASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SEL1L3Q68CR1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.55■■□□□ 1.2
SEL1L3Q68CR1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SEL1L3Q68CR1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SEL1L3Q68CR1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SEL1L3Q68CR1 AF213884.3-201ENST00000563833 479 ntBASIC22.55■■□□□ 1.2
SEL1L3Q68CR1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.55■■□□□ 1.2
SEL1L3Q68CR1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.55■■□□□ 1.2
SEL1L3Q68CR1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SEL1L3Q68CR1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SEL1L3Q68CR1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.55■■□□□ 1.2
SEL1L3Q68CR1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEL1L3Q68CR1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SEL1L3Q68CR1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.54■■□□□ 1.2
SEL1L3Q68CR1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEL1L3Q68CR1 AC009086.3-201ENST00000623486 1008 ntBASIC22.54■■□□□ 1.2
SEL1L3Q68CR1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SEL1L3Q68CR1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEL1L3Q68CR1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEL1L3Q68CR1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEL1L3Q68CR1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.54■■□□□ 1.2
SEL1L3Q68CR1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 AP001330.3-201ENST00000520123 633 ntBASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 AL136967.2-201ENST00000623968 743 ntBASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEL1L3Q68CR1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.52■■□□□ 1.2
SEL1L3Q68CR1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.52■■□□□ 1.2
SEL1L3Q68CR1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.52■■□□□ 1.2
SEL1L3Q68CR1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SEL1L3Q68CR1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SEL1L3Q68CR1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 MIR939-201ENST00000401314 82 ntBASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 AL138724.1-201ENST00000606771 1088 ntBASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 AC011298.3-201ENST00000615796 283 ntBASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.51■■□□□ 1.19
SEL1L3Q68CR1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SEL1L3Q68CR1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SEL1L3Q68CR1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SEL1L3Q68CR1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SEL1L3Q68CR1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SEL1L3Q68CR1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SEL1L3Q68CR1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SEL1L3Q68CR1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SEL1L3Q68CR1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.5■■□□□ 1.19
SEL1L3Q68CR1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.5■■□□□ 1.19
SEL1L3Q68CR1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms