Protein–RNA interactions for Protein: Q5TCZ1

SH3PXD2A, SH3 and PX domain-containing protein 2A, humanhuman

Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2AQ5TCZ1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SH3PXD2AQ5TCZ1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.33■■□□□ 1.33
SH3PXD2AQ5TCZ1 AL512631.2-201ENST00000604634 923 ntBASIC23.33■■□□□ 1.33
SH3PXD2AQ5TCZ1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3PXD2AQ5TCZ1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SH3PXD2AQ5TCZ1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SH3PXD2AQ5TCZ1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 PBX2P1-201ENST00000493219 1291 ntBASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 MIR5787-201ENST00000611784 55 ntBASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SH3PXD2AQ5TCZ1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 AC106739.1-201ENST00000617035 715 ntBASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH3PXD2AQ5TCZ1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 LINC01529-204ENST00000636474 1715 ntBASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 AC135279.3-201ENST00000610945 1311 ntBASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.3■■□□□ 1.32
SH3PXD2AQ5TCZ1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 C1orf229-201ENST00000623686 2258 ntBASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SH3PXD2AQ5TCZ1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 FP325331.1-202ENST00000623531 1380 ntBASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH3PXD2AQ5TCZ1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
SH3PXD2AQ5TCZ1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.27■■□□□ 1.32
SH3PXD2AQ5TCZ1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.27■■□□□ 1.32
SH3PXD2AQ5TCZ1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SH3PXD2AQ5TCZ1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SH3PXD2AQ5TCZ1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SH3PXD2AQ5TCZ1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SH3PXD2AQ5TCZ1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3PXD2AQ5TCZ1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH3PXD2AQ5TCZ1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.25■■□□□ 1.31
SH3PXD2AQ5TCZ1 DUX4L4-201ENST00000566884 1269 ntBASIC23.25■■□□□ 1.31
SH3PXD2AQ5TCZ1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SH3PXD2AQ5TCZ1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH3PXD2AQ5TCZ1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SH3PXD2AQ5TCZ1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SH3PXD2AQ5TCZ1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SH3PXD2AQ5TCZ1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.24■■□□□ 1.31
SH3PXD2AQ5TCZ1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.24■■□□□ 1.31
SH3PXD2AQ5TCZ1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.24■■□□□ 1.31
SH3PXD2AQ5TCZ1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.24■■□□□ 1.31
SH3PXD2AQ5TCZ1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SH3PXD2AQ5TCZ1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.23■■□□□ 1.31
SH3PXD2AQ5TCZ1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms