Protein–RNA interactions for Protein: Q5R3I4

TTC38, Tetratricopeptide repeat protein 38, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38Q5R3I4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.32■■□□□ 1.64
TTC38Q5R3I4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.32■■□□□ 1.64
TTC38Q5R3I4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TTC38Q5R3I4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TTC38Q5R3I4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TTC38Q5R3I4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
TTC38Q5R3I4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TTC38Q5R3I4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.31■■□□□ 1.64
TTC38Q5R3I4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
TTC38Q5R3I4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.31■■□□□ 1.64
TTC38Q5R3I4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
TTC38Q5R3I4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TTC38Q5R3I4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
TTC38Q5R3I4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.3■■□□□ 1.64
TTC38Q5R3I4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.3■■□□□ 1.64
TTC38Q5R3I4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.3■■□□□ 1.64
TTC38Q5R3I4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.3■■□□□ 1.64
TTC38Q5R3I4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TTC38Q5R3I4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.3■■□□□ 1.64
TTC38Q5R3I4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.3■■□□□ 1.64
TTC38Q5R3I4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TTC38Q5R3I4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
TTC38Q5R3I4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TTC38Q5R3I4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.29■■□□□ 1.64
TTC38Q5R3I4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TTC38Q5R3I4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
TTC38Q5R3I4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TTC38Q5R3I4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TTC38Q5R3I4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.28■■□□□ 1.64
TTC38Q5R3I4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TTC38Q5R3I4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.28■■□□□ 1.64
TTC38Q5R3I4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TTC38Q5R3I4 AC009086.3-201ENST00000623486 1008 ntBASIC25.28■■□□□ 1.64
TTC38Q5R3I4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TTC38Q5R3I4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TTC38Q5R3I4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.28■■□□□ 1.64
TTC38Q5R3I4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TTC38Q5R3I4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 AC241377.3-202ENST00000626088 1088 ntBASIC25.27■■□□□ 1.64
TTC38Q5R3I4 AC241585.3-202ENST00000628937 1088 ntBASIC25.27■■□□□ 1.64
TTC38Q5R3I4 AC245100.8-202ENST00000629247 1058 ntBASIC25.27■■□□□ 1.64
TTC38Q5R3I4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
TTC38Q5R3I4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 AC006455.2-201ENST00000429931 906 ntBASIC25.26■■□□□ 1.63
TTC38Q5R3I4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 AC099791.2-201ENST00000605725 427 ntBASIC25.26■■□□□ 1.63
TTC38Q5R3I4 MIR4466-201ENST00000606121 54 ntBASIC25.26■■□□□ 1.63
TTC38Q5R3I4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.26■■□□□ 1.63
TTC38Q5R3I4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TTC38Q5R3I4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.24■■□□□ 1.63
TTC38Q5R3I4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 SRD5A1P1-201ENST00000442297 786 ntBASIC25.24■■□□□ 1.63
TTC38Q5R3I4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 AC131281.2-201ENST00000520478 145 ntBASIC25.24■■□□□ 1.63
TTC38Q5R3I4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
TTC38Q5R3I4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
TTC38Q5R3I4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
TTC38Q5R3I4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TTC38Q5R3I4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.23■■□□□ 1.63
TTC38Q5R3I4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.23■■□□□ 1.63
TTC38Q5R3I4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TTC38Q5R3I4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
TTC38Q5R3I4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TTC38Q5R3I4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms