Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRFAM7AQ494W8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.31■□□□□ 0.68
CHRFAM7AQ494W8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHRFAM7AQ494W8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHRFAM7AQ494W8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRFAM7AQ494W8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRFAM7AQ494W8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHRFAM7AQ494W8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
CHRFAM7AQ494W8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.31■□□□□ 0.68
CHRFAM7AQ494W8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 AC233723.2-201ENST00000623798 2106 ntBASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRFAM7AQ494W8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 UNC93B3-201ENST00000308076 687 ntBASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 ANOS2P-203ENST00000472227 1816 ntBASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRFAM7AQ494W8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 AL136162.1-201ENST00000607711 1078 ntBASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRFAM7AQ494W8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRFAM7AQ494W8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRFAM7AQ494W8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRFAM7AQ494W8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHRFAM7AQ494W8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRFAM7AQ494W8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRFAM7AQ494W8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRFAM7AQ494W8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CHRFAM7AQ494W8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.27■□□□□ 0.67
CHRFAM7AQ494W8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRFAM7AQ494W8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRFAM7AQ494W8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHRFAM7AQ494W8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 SUDS3P1-201ENST00000505831 966 ntBASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRFAM7AQ494W8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 EDA-201ENST00000338901 1233 ntBASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 AL355001.2-201ENST00000620617 1191 ntBASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRFAM7AQ494W8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.24■□□□□ 0.67
CHRFAM7AQ494W8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRFAM7AQ494W8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRFAM7AQ494W8 CLDN5-201ENST00000403084 2357 ntBASIC19.24■□□□□ 0.67
CHRFAM7AQ494W8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRFAM7AQ494W8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRFAM7AQ494W8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms