Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 ULS1YOR191W 4860 nt3.89□□□□□ -1.79
RRP40Q08285 YDL228CYDL228C 642 nt3.89□□□□□ -1.79
RRP40Q08285 MRP4YHL004W 1185 nt3.89□□□□□ -1.79
RRP40Q08285 MHO1YJR008W 1017 nt3.89□□□□□ -1.79
RRP40Q08285 YJR038CYJR038C 363 nt3.89□□□□□ -1.79
RRP40Q08285 SPC42YKL042W 1092 nt3.89□□□□□ -1.79
RRP40Q08285 YOR289WYOR289W 756 nt3.89□□□□□ -1.79
RRP40Q08285 HCM1YCR065W 1695 nt3.88□□□□□ -1.79
RRP40Q08285 YDL109CYDL109C 1944 nt3.88□□□□□ -1.79
RRP40Q08285 YDR132CYDR132C 1488 nt3.88□□□□□ -1.79
RRP40Q08285 DPB4YDR121W 591 nt3.88□□□□□ -1.79
RRP40Q08285 PHA2YNL316C 1005 nt3.88□□□□□ -1.79
RRP40Q08285 MRM1YOR201C 1239 nt3.88□□□□□ -1.79
RRP40Q08285 YPL014WYPL014W 1146 nt3.88□□□□□ -1.79
RRP40Q08285 SKM1YOL113W 1968 nt3.88□□□□□ -1.79
RRP40Q08285 BUD8YLR353W 1812 nt3.88□□□□□ -1.79
RRP40Q08285 EKI1YDR147W 1605 nt3.88□□□□□ -1.79
RRP40Q08285 YCF1YDR135C 4548 nt3.87□□□□□ -1.79
RRP40Q08285 MAL13YGR288W 1422 nt3.87□□□□□ -1.79
RRP40Q08285 SMF1YOL122C 1728 nt3.87□□□□□ -1.79
RRP40Q08285 RIA1YNL163C 3333 nt3.87□□□□□ -1.79
RRP40Q08285 FAS2YPL231W 5664 nt3.87□□□□□ -1.79
RRP40Q08285 NUP133YKR082W 3474 nt3.87□□□□□ -1.79
RRP40Q08285 CAF16YFL028C 870 nt3.87□□□□□ -1.79
RRP40Q08285 COS4YFL062W 1140 nt3.87□□□□□ -1.79
RRP40Q08285 CSM2YIL132C 642 nt3.87□□□□□ -1.79
RRP40Q08285 COS3YML132W 1140 nt3.87□□□□□ -1.79
RRP40Q08285 COS2YBR302C 1140 nt3.87□□□□□ -1.79
RRP40Q08285 MET17YLR303W 1335 nt3.87□□□□□ -1.79
RRP40Q08285 TAF12YDR145W 1620 nt3.87□□□□□ -1.79
RRP40Q08285 TEL1YBL088C 8364 nt3.86□□□□□ -1.79
RRP40Q08285 HSP30YCR021C 999 nt3.86□□□□□ -1.79
RRP40Q08285 snR7-LsnR7-L 214 nt3.86□□□□□ -1.79
RRP40Q08285 KTR2YKR061W 1278 nt3.86□□□□□ -1.79
RRP40Q08285 YLR036CYLR036C 612 nt3.86□□□□□ -1.79
RRP40Q08285 RPS0BYLR048W 759 nt3.86□□□□□ -1.79
RRP40Q08285 PER33YLR064W 822 nt3.86□□□□□ -1.79
RRP40Q08285 YMR130WYMR130W 909 nt3.86□□□□□ -1.79
RRP40Q08285 EMP47YFL048C 1338 nt3.86□□□□□ -1.79
RRP40Q08285 NOC2YOR206W 2133 nt3.86□□□□□ -1.79
RRP40Q08285 MST1YKL194C 1389 nt3.86□□□□□ -1.79
RRP40Q08285 SVF1YDR346C 1446 nt3.86□□□□□ -1.79
RRP40Q08285 GIP4YAL031C 2283 nt3.86□□□□□ -1.79
RRP40Q08285 DIT2YDR402C 1470 nt3.86□□□□□ -1.79
RRP40Q08285 ECM22YLR228C 2445 nt3.85□□□□□ -1.79
RRP40Q08285 OAF1YAL051W 3144 nt3.85□□□□□ -1.79
RRP40Q08285 YDL094CYDL094C 510 nt3.85□□□□□ -1.79
RRP40Q08285 PCL6YER059W 1263 nt3.85□□□□□ -1.79
RRP40Q08285 AAD10YJR155W 867 nt3.85□□□□□ -1.79
RRP40Q08285 YLR374CYLR374C 390 nt3.85□□□□□ -1.79
RRP40Q08285 YPL114WYPL114W 420 nt3.85□□□□□ -1.79
RRP40Q08285 GRS2YPR081C 1857 nt3.85□□□□□ -1.79
RRP40Q08285 TRF5YNL299W 1929 nt3.85□□□□□ -1.79
RRP40Q08285 VPS73YGL104C 1461 nt3.85□□□□□ -1.79
RRP40Q08285 OSH2YDL019C 3852 nt3.84□□□□□ -1.79
RRP40Q08285 TAF7YMR227C 1773 nt3.84□□□□□ -1.79
RRP40Q08285 GAL11YOL051W 3246 nt3.84□□□□□ -1.79
RRP40Q08285 SAS10YDL153C 1833 nt3.84□□□□□ -1.79
RRP40Q08285 MRPL25YGR076C 474 nt3.84□□□□□ -1.79
RRP40Q08285 SOL4YGR248W 768 nt3.84□□□□□ -1.79
RRP40Q08285 GVP36YIL041W 981 nt3.84□□□□□ -1.79
RRP40Q08285 UIP3YAR027W 708 nt3.84□□□□□ -1.79
RRP40Q08285 YML116W-AYML116W-A 303 nt3.84□□□□□ -1.79
RRP40Q08285 YBR141W-AYBR141W-A 96 nt3.84□□□□□ -1.79
RRP40Q08285 EFM2YBR271W 1260 nt3.84□□□□□ -1.79
RRP40Q08285 SPT23YKL020C 3249 nt3.84□□□□□ -1.79
RRP40Q08285 MMT1YMR177W 1533 nt3.84□□□□□ -1.8
RRP40Q08285 RSC3YDR303C 2658 nt3.84□□□□□ -1.8
RRP40Q08285 CDC14YFR028C 1656 nt3.84□□□□□ -1.8
RRP40Q08285 SRO7YPR032W 3102 nt3.84□□□□□ -1.8
RRP40Q08285 NHX1YDR456W 1902 nt3.83□□□□□ -1.8
RRP40Q08285 VMA1YDL185W 3216 nt3.83□□□□□ -1.8
RRP40Q08285 ELO2YCR034W 1044 nt3.83□□□□□ -1.8
RRP40Q08285 YDL183CYDL183C 963 nt3.83□□□□□ -1.8
RRP40Q08285 SPC19YDR201W 498 nt3.83□□□□□ -1.8
RRP40Q08285 SPO74YGL170C 1242 nt3.83□□□□□ -1.8
RRP40Q08285 PRE9YGR135W 777 nt3.83□□□□□ -1.8
RRP40Q08285 LSB1YGR136W 726 nt3.83□□□□□ -1.8
RRP40Q08285 RPL14AYKL006W 417 nt3.83□□□□□ -1.8
RRP40Q08285 KRE29YER038C 1395 nt3.83□□□□□ -1.8
RRP40Q08285 LAP3YNL239W 1365 nt3.83□□□□□ -1.8
RRP40Q08285 GAS4YOL132W 1416 nt3.83□□□□□ -1.8
RRP40Q08285 SEC2YNL272C 2280 nt3.83□□□□□ -1.8
RRP40Q08285 MIS1YBR084W 2928 nt3.82□□□□□ -1.8
RRP40Q08285 GAS5YOL030W 1455 nt3.82□□□□□ -1.8
RRP40Q08285 RPP1AYDL081C 321 nt3.82□□□□□ -1.8
RRP40Q08285 YDR274CYDR274C 372 nt3.82□□□□□ -1.8
RRP40Q08285 COX4YGL187C 468 nt3.82□□□□□ -1.8
RRP40Q08285 YPR059CYPR059C 387 nt3.82□□□□□ -1.8
RRP40Q08285 MCM2YBL023C 2607 nt3.82□□□□□ -1.8
RRP40Q08285 OPT2YPR194C 2634 nt3.82□□□□□ -1.8
RRP40Q08285 HMG1YML075C 3165 nt3.81□□□□□ -1.8
RRP40Q08285 RCM1YNL022C 1473 nt3.81□□□□□ -1.8
RRP40Q08285 DXO1YDR370C 1329 nt3.81□□□□□ -1.8
RRP40Q08285 RPS13YDR064W 456 nt3.81□□□□□ -1.8
RRP40Q08285 BUD16YEL029C 939 nt3.81□□□□□ -1.8
RRP40Q08285 SKI8YGL213C 1194 nt3.81□□□□□ -1.8
RRP40Q08285 CYC1YJR048W 330 nt3.81□□□□□ -1.8
RRP40Q08285 EOS1YNL080C 1101 nt3.81□□□□□ -1.8
RRP40Q08285 POP3YNL282W 588 nt3.81□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms