Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 YML031C-AYML031C-A 336 nt3.48□□□□□ -1.85
HRD1Q08109 VPS68YOL129W 555 nt3.48□□□□□ -1.85
HRD1Q08109 YPR059CYPR059C 387 nt3.48□□□□□ -1.85
HRD1Q08109 SWI1YPL016W 3945 nt3.48□□□□□ -1.85
HRD1Q08109 TPA1YER049W 1935 nt3.48□□□□□ -1.85
HRD1Q08109 BRE4YDL231C 3378 nt3.48□□□□□ -1.85
HRD1Q08109 SSH1YBR283C 1473 nt3.47□□□□□ -1.85
HRD1Q08109 PHO13YDL236W 939 nt3.47□□□□□ -1.85
HRD1Q08109 AAD6YFL056C 639 nt3.47□□□□□ -1.85
HRD1Q08109 YFR034W-AYFR034W-A 288 nt3.47□□□□□ -1.85
HRD1Q08109 PRE9YGR135W 777 nt3.47□□□□□ -1.85
HRD1Q08109 YHR145CYHR145C 357 nt3.47□□□□□ -1.85
HRD1Q08109 YIL163CYIL163C 354 nt3.47□□□□□ -1.85
HRD1Q08109 CCS1YMR038C 750 nt3.47□□□□□ -1.85
HRD1Q08109 YPL278CYPL278C 303 nt3.47□□□□□ -1.85
HRD1Q08109 VPS69YPR087W 321 nt3.47□□□□□ -1.85
HRD1Q08109 YBR196C-BYBR196C-B 105 nt3.47□□□□□ -1.85
HRD1Q08109 PRP19YLL036C 1512 nt3.47□□□□□ -1.85
HRD1Q08109 YRM1YOR172W 2361 nt3.47□□□□□ -1.85
HRD1Q08109 RNA14YMR061W 2034 nt3.46□□□□□ -1.86
HRD1Q08109 STV1YMR054W 2673 nt3.46□□□□□ -1.86
HRD1Q08109 PTC1YDL006W 846 nt3.46□□□□□ -1.86
HRD1Q08109 FRA2YGL220W 363 nt3.46□□□□□ -1.86
HRD1Q08109 ISY1YJR050W 708 nt3.46□□□□□ -1.86
HRD1Q08109 RPL14AYKL006W 417 nt3.46□□□□□ -1.86
HRD1Q08109 RPS1BYML063W 768 nt3.46□□□□□ -1.86
HRD1Q08109 RRN9YMR270C 1098 nt3.46□□□□□ -1.86
HRD1Q08109 RAD17YOR368W 1206 nt3.46□□□□□ -1.86
HRD1Q08109 snR37snR37 386 nt3.46□□□□□ -1.86
HRD1Q08109 SRB6YBR253W 366 nt3.46□□□□□ -1.86
HRD1Q08109 SPC105YGL093W 2754 nt3.46□□□□□ -1.86
HRD1Q08109 ERG4YGL012W 1422 nt3.45□□□□□ -1.86
HRD1Q08109 RPC53YDL150W 1269 nt3.45□□□□□ -1.86
HRD1Q08109 ARP10YDR106W 855 nt3.45□□□□□ -1.86
HRD1Q08109 TIP20YGL145W 2106 nt3.45□□□□□ -1.86
HRD1Q08109 HEK2YBL032W 1146 nt3.45□□□□□ -1.86
HRD1Q08109 YBL059WYBL059W 582 nt3.45□□□□□ -1.86
HRD1Q08109 AST1YBL069W 1290 nt3.45□□□□□ -1.86
HRD1Q08109 YNL228WYNL228W 777 nt3.45□□□□□ -1.86
HRD1Q08109 RRP40YOL142W 723 nt3.45□□□□□ -1.86
HRD1Q08109 CEG1YGL130W 1380 nt3.45□□□□□ -1.86
HRD1Q08109 TRM11YOL124C 1302 nt3.44□□□□□ -1.86
HRD1Q08109 IDS2YJL146W 1410 nt3.44□□□□□ -1.86
HRD1Q08109 SAF1YBR280C 1914 nt3.44□□□□□ -1.86
HRD1Q08109 FLO8YER109C 2400 nt3.44□□□□□ -1.86
HRD1Q08109 CHL1YPL008W 2586 nt3.44□□□□□ -1.86
HRD1Q08109 PDR12YPL058C 4536 nt3.44□□□□□ -1.86
HRD1Q08109 ELO2YCR034W 1044 nt3.44□□□□□ -1.86
HRD1Q08109 HSP42YDR171W 1128 nt3.44□□□□□ -1.86
HRD1Q08109 YHR112CYHR112C 1137 nt3.44□□□□□ -1.86
HRD1Q08109 LNP1YHR192W 837 nt3.44□□□□□ -1.86
HRD1Q08109 NSE1YLR007W 1011 nt3.44□□□□□ -1.86
HRD1Q08109 YMR086C-AYMR086C-A 339 nt3.44□□□□□ -1.86
HRD1Q08109 YOR379CYOR379C 339 nt3.44□□□□□ -1.86
HRD1Q08109 SCD6YPR129W 1050 nt3.44□□□□□ -1.86
HRD1Q08109 PWR1PWR1 941 nt3.44□□□□□ -1.86
HRD1Q08109 EFM2YBR271W 1260 nt3.44□□□□□ -1.86
HRD1Q08109 RER1YCL001W 567 nt3.44□□□□□ -1.86
HRD1Q08109 GCD1YOR260W 1737 nt3.44□□□□□ -1.86
HRD1Q08109 BUD5YCR038C 1929 nt3.43□□□□□ -1.86
HRD1Q08109 RXT3YDL076C 885 nt3.43□□□□□ -1.86
HRD1Q08109 DAS2YDR020C 699 nt3.43□□□□□ -1.86
HRD1Q08109 NBP2YDR162C 711 nt3.43□□□□□ -1.86
HRD1Q08109 SEC72YLR292C 582 nt3.43□□□□□ -1.86
HRD1Q08109 YNG1YOR064C 660 nt3.43□□□□□ -1.86
HRD1Q08109 HPR1YDR138W 2259 nt3.43□□□□□ -1.86
HRD1Q08109 YEH2YLR020C 1617 nt3.43□□□□□ -1.86
HRD1Q08109 XRS2YDR369C 2565 nt3.43□□□□□ -1.86
HRD1Q08109 FLO10YKR102W 3510 nt3.43□□□□□ -1.86
HRD1Q08109 AIM22YJL046W 1230 nt3.42□□□□□ -1.86
HRD1Q08109 YLR364C-AYLR364C-A 123 nt3.42□□□□□ -1.86
HRD1Q08109 YMR010WYMR010W 1218 nt3.42□□□□□ -1.86
HRD1Q08109 YNR042WYNR042W 429 nt3.42□□□□□ -1.86
HRD1Q08109 YBR103C-AYBR103C-A 144 nt3.42□□□□□ -1.86
HRD1Q08109 NUP159YIL115C 4383 nt3.42□□□□□ -1.86
HRD1Q08109 TFA1YKL028W 1449 nt3.42□□□□□ -1.86
HRD1Q08109 LYP1YNL268W 1836 nt3.42□□□□□ -1.86
HRD1Q08109 YEL053W-AYEL053W-A 348 nt3.41□□□□□ -1.86
HRD1Q08109 YHR140WYHR140W 720 nt3.41□□□□□ -1.86
HRD1Q08109 YNK1YKL067W 462 nt3.41□□□□□ -1.86
HRD1Q08109 RPP0YLR340W 939 nt3.41□□□□□ -1.86
HRD1Q08109 MED4YOR174W 855 nt3.41□□□□□ -1.86
HRD1Q08109 MSK1YNL073W 1731 nt3.41□□□□□ -1.86
HRD1Q08109 MSN4YKL062W 1893 nt3.41□□□□□ -1.86
HRD1Q08109 ZRC1YMR243C 1329 nt3.41□□□□□ -1.86
HRD1Q08109 GAS5YOL030W 1455 nt3.41□□□□□ -1.86
HRD1Q08109 ADY3YDL239C 2373 nt3.4□□□□□ -1.86
HRD1Q08109 YGL140CYGL140C 3660 nt3.4□□□□□ -1.86
HRD1Q08109 MCM7YBR202W 2538 nt3.4□□□□□ -1.86
HRD1Q08109 UGA3YDL170W 1587 nt3.4□□□□□ -1.87
HRD1Q08109 COS4YFL062W 1140 nt3.4□□□□□ -1.87
HRD1Q08109 IDP2YLR174W 1239 nt3.4□□□□□ -1.87
HRD1Q08109 COS3YML132W 1140 nt3.4□□□□□ -1.87
HRD1Q08109 YNR065CYNR065C 3351 nt3.4□□□□□ -1.87
HRD1Q08109 HEM15YOR176W 1182 nt3.4□□□□□ -1.87
HRD1Q08109 FSH3YOR280C 801 nt3.4□□□□□ -1.87
HRD1Q08109 COS2YBR302C 1140 nt3.4□□□□□ -1.87
HRD1Q08109 PTA1YAL043C 2358 nt3.4□□□□□ -1.87
HRD1Q08109 BIK1YCL029C 1323 nt3.4□□□□□ -1.87
HRD1Q08109 SYF1YDR416W 2580 nt3.4□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms