Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC30.66■■■□□ 2.5
COL16A1Q07092 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
COL16A1Q07092 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
COL16A1Q07092 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
COL16A1Q07092 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.66■■■□□ 2.5
COL16A1Q07092 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
COL16A1Q07092 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
COL16A1Q07092 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC30.65■■■□□ 2.5
COL16A1Q07092 AC098590.1-201ENST00000468126 897 ntBASIC30.65■■■□□ 2.5
COL16A1Q07092 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
COL16A1Q07092 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
COL16A1Q07092 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
COL16A1Q07092 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC30.65■■■□□ 2.5
COL16A1Q07092 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
COL16A1Q07092 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL16A1Q07092 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
COL16A1Q07092 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL16A1Q07092 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
COL16A1Q07092 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL16A1Q07092 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC30.64■■■□□ 2.5
COL16A1Q07092 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL16A1Q07092 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
COL16A1Q07092 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL16A1Q07092 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
COL16A1Q07092 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.64■■■□□ 2.5
COL16A1Q07092 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC30.64■■■□□ 2.5
COL16A1Q07092 PRORSD1P-201ENST00000295112 541 ntBASIC30.63■■■□□ 2.49
COL16A1Q07092 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
COL16A1Q07092 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC30.63■■■□□ 2.49
COL16A1Q07092 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC30.63■■■□□ 2.49
COL16A1Q07092 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
COL16A1Q07092 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
COL16A1Q07092 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
COL16A1Q07092 SLC29A4P1-201ENST00000398760 971 ntBASIC30.62■■■□□ 2.49
COL16A1Q07092 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC30.62■■■□□ 2.49
COL16A1Q07092 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC30.62■■■□□ 2.49
COL16A1Q07092 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC30.62■■■□□ 2.49
COL16A1Q07092 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL16A1Q07092 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC30.62■■■□□ 2.49
COL16A1Q07092 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
COL16A1Q07092 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL16A1Q07092 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC30.61■■■□□ 2.49
COL16A1Q07092 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.61■■■□□ 2.49
COL16A1Q07092 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL16A1Q07092 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC30.61■■■□□ 2.49
COL16A1Q07092 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
COL16A1Q07092 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.6■■■□□ 2.49
COL16A1Q07092 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
COL16A1Q07092 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
COL16A1Q07092 AC231657.2-201ENST00000624556 255 ntBASIC30.6■■■□□ 2.49
COL16A1Q07092 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
COL16A1Q07092 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
COL16A1Q07092 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC30.59■■■□□ 2.49
COL16A1Q07092 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
COL16A1Q07092 AC073210.2-201ENST00000430369 194 ntBASIC30.59■■■□□ 2.49
COL16A1Q07092 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC30.59■■■□□ 2.49
COL16A1Q07092 DUX4L16-201ENST00000555130 1264 ntBASIC30.59■■■□□ 2.49
COL16A1Q07092 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
COL16A1Q07092 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
COL16A1Q07092 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
COL16A1Q07092 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
COL16A1Q07092 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
COL16A1Q07092 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
COL16A1Q07092 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL16A1Q07092 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC30.58■■■□□ 2.49
COL16A1Q07092 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
COL16A1Q07092 AC005181.1-201ENST00000604782 1256 ntBASIC30.58■■■□□ 2.49
COL16A1Q07092 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.58■■■□□ 2.49
COL16A1Q07092 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL16A1Q07092 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
COL16A1Q07092 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
COL16A1Q07092 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
COL16A1Q07092 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC30.58■■■□□ 2.49
COL16A1Q07092 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
COL16A1Q07092 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL16A1Q07092 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
COL16A1Q07092 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL16A1Q07092 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL16A1Q07092 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC30.56■■■□□ 2.48
COL16A1Q07092 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
COL16A1Q07092 PFKL-212ENST00000628044 129 ntTSL 3 BASIC30.56■■■□□ 2.48
COL16A1Q07092 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
COL16A1Q07092 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL16A1Q07092 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL16A1Q07092 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
COL16A1Q07092 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL16A1Q07092 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
COL16A1Q07092 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
COL16A1Q07092 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
COL16A1Q07092 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
COL16A1Q07092 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC30.55■■■□□ 2.48
COL16A1Q07092 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
COL16A1Q07092 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC30.54■■■□□ 2.48
COL16A1Q07092 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC30.54■■■□□ 2.48
COL16A1Q07092 TESC-206ENST00000541210 936 ntTSL 3 BASIC30.54■■■□□ 2.48
COL16A1Q07092 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.54■■■□□ 2.48
COL16A1Q07092 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL16A1Q07092 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL16A1Q07092 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.53■■■□□ 2.48
COL16A1Q07092 BX005040.4-201ENST00000637145 1518 ntBASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms