Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 tQ(UUG)D3tQ(UUG)D3 72 nt4.54□□□□□ -1.68
VTI1Q04338 tQ(UUG)E1tQ(UUG)E1 72 nt4.54□□□□□ -1.68
VTI1Q04338 tQ(UUG)HtQ(UUG)H 72 nt4.54□□□□□ -1.68
VTI1Q04338 tQ(UUG)LtQ(UUG)L 72 nt4.54□□□□□ -1.68
VTI1Q04338 VMA22YHR060W 546 nt4.54□□□□□ -1.68
VTI1Q04338 YBL029WYBL029W 1131 nt4.54□□□□□ -1.68
VTI1Q04338 YDC1YPL087W 954 nt4.54□□□□□ -1.68
VTI1Q04338 EMP47YFL048C 1338 nt4.53□□□□□ -1.68
VTI1Q04338 GPI18YBR004C 1302 nt4.53□□□□□ -1.68
VTI1Q04338 RRN11YML043C 1524 nt4.53□□□□□ -1.68
VTI1Q04338 TAF8YML114C 1533 nt4.53□□□□□ -1.68
VTI1Q04338 TAF10YDR167W 621 nt4.53□□□□□ -1.68
VTI1Q04338 YGP1YNL160W 1065 nt4.53□□□□□ -1.68
VTI1Q04338 PCL1YNL289W 840 nt4.53□□□□□ -1.68
VTI1Q04338 SIP1YDR422C 2448 nt4.53□□□□□ -1.68
VTI1Q04338 BUD5YCR038C 1929 nt4.52□□□□□ -1.69
VTI1Q04338 GCD1YOR260W 1737 nt4.52□□□□□ -1.69
VTI1Q04338 BUD8YLR353W 1812 nt4.52□□□□□ -1.69
VTI1Q04338 JAC1YGL018C 555 nt4.52□□□□□ -1.69
VTI1Q04338 SOL4YGR248W 768 nt4.52□□□□□ -1.69
VTI1Q04338 YLR407WYLR407W 687 nt4.52□□□□□ -1.69
VTI1Q04338 RCL1YOL010W 1104 nt4.52□□□□□ -1.69
VTI1Q04338 ECM23YPL021W 564 nt4.52□□□□□ -1.69
VTI1Q04338 MGR2YPL098C 342 nt4.52□□□□□ -1.69
VTI1Q04338 ISA2YPR067W 558 nt4.52□□□□□ -1.69
VTI1Q04338 YDR261C-DYDR261C-D 4815 nt4.52□□□□□ -1.69
VTI1Q04338 IOC4YMR044W 1428 nt4.52□□□□□ -1.69
VTI1Q04338 NGL3YML118W 1518 nt4.51□□□□□ -1.69
VTI1Q04338 JHD2YJR119C 2187 nt4.51□□□□□ -1.69
VTI1Q04338 ALG11YNL048W 1647 nt4.51□□□□□ -1.69
VTI1Q04338 CIA2YHR122W 696 nt4.51□□□□□ -1.69
VTI1Q04338 NKP2YLR315W 462 nt4.51□□□□□ -1.69
VTI1Q04338 YLR374CYLR374C 390 nt4.51□□□□□ -1.69
VTI1Q04338 SUI1YNL244C 327 nt4.51□□□□□ -1.69
VTI1Q04338 INA17YPL099C 549 nt4.51□□□□□ -1.69
VTI1Q04338 BSD2YBR290W 966 nt4.51□□□□□ -1.69
VTI1Q04338 ALE1YOR175C 1860 nt4.51□□□□□ -1.69
VTI1Q04338 UBP10YNL186W 2379 nt4.5□□□□□ -1.69
VTI1Q04338 SKG6YHR149C 2205 nt4.5□□□□□ -1.69
VTI1Q04338 VPS73YGL104C 1461 nt4.5□□□□□ -1.69
VTI1Q04338 RIA1YNL163C 3333 nt4.5□□□□□ -1.69
VTI1Q04338 YLR152CYLR152C 1731 nt4.5□□□□□ -1.69
VTI1Q04338 YEL028WYEL028W 462 nt4.5□□□□□ -1.69
VTI1Q04338 YGL262WYGL262W 528 nt4.5□□□□□ -1.69
VTI1Q04338 PRE9YGR135W 777 nt4.5□□□□□ -1.69
VTI1Q04338 PIR3YKL163W 978 nt4.5□□□□□ -1.69
VTI1Q04338 YGK3YOL128C 1128 nt4.5□□□□□ -1.69
VTI1Q04338 YAR1YPL239W 603 nt4.5□□□□□ -1.69
VTI1Q04338 FRM2YCL026C-A 582 nt4.5□□□□□ -1.69
VTI1Q04338 SSH1YBR283C 1473 nt4.49□□□□□ -1.69
VTI1Q04338 YOL153CYOL153C 1746 nt4.49□□□□□ -1.69
VTI1Q04338 SEC72YLR292C 582 nt4.49□□□□□ -1.69
VTI1Q04338 YMR130WYMR130W 909 nt4.49□□□□□ -1.69
VTI1Q04338 RNA1YMR235C 1224 nt4.49□□□□□ -1.69
VTI1Q04338 GPB1YOR371C 2694 nt4.49□□□□□ -1.69
VTI1Q04338 NUG1YER006W 1563 nt4.48□□□□□ -1.69
VTI1Q04338 ROK1YGL171W 1695 nt4.48□□□□□ -1.69
VTI1Q04338 MIH1YMR036C 1665 nt4.48□□□□□ -1.69
VTI1Q04338 RKM3YBR030W 1659 nt4.48□□□□□ -1.69
VTI1Q04338 PUF2YPR042C 3228 nt4.48□□□□□ -1.69
VTI1Q04338 LAS1YKR063C 1509 nt4.48□□□□□ -1.69
VTI1Q04338 VAC17YCL063W 1272 nt4.48□□□□□ -1.69
VTI1Q04338 ATP5YDR298C 639 nt4.48□□□□□ -1.69
VTI1Q04338 RPL24AYGL031C 468 nt4.48□□□□□ -1.69
VTI1Q04338 YLF2YHL014C 1218 nt4.48□□□□□ -1.69
VTI1Q04338 YIL171WYIL171W 330 nt4.48□□□□□ -1.69
VTI1Q04338 TDA5YLR426W 981 nt4.48□□□□□ -1.69
VTI1Q04338 TOM7YNL070W 183 nt4.48□□□□□ -1.69
VTI1Q04338 TPA1YER049W 1935 nt4.48□□□□□ -1.69
VTI1Q04338 tR(ACG)JtR(ACG)J 73 nt4.47□□□□□ -1.69
VTI1Q04338 DBR1YKL149C 1218 nt4.47□□□□□ -1.69
VTI1Q04338 FKH1YIL131C 1455 nt4.47□□□□□ -1.69
VTI1Q04338 MCD4YKL165C 2760 nt4.47□□□□□ -1.69
VTI1Q04338 YRB30YGL164C 1323 nt4.46□□□□□ -1.69
VTI1Q04338 SEN1YLR430W 6696 nt4.46□□□□□ -1.69
VTI1Q04338 SIR1YKR101W 1965 nt4.46□□□□□ -1.7
VTI1Q04338 ALO1YML086C 1581 nt4.46□□□□□ -1.7
VTI1Q04338 YDL094CYDL094C 510 nt4.46□□□□□ -1.7
VTI1Q04338 SPO73YER046W 432 nt4.46□□□□□ -1.7
VTI1Q04338 RDN5-1RDN5-1 121 nt4.46□□□□□ -1.7
VTI1Q04338 RDN5-6RDN5-6 121 nt4.46□□□□□ -1.7
VTI1Q04338 ATG33YLR356W 594 nt4.46□□□□□ -1.7
VTI1Q04338 ARO7YPR060C 771 nt4.46□□□□□ -1.7
VTI1Q04338 DIP2YLR129W 2832 nt4.46□□□□□ -1.7
VTI1Q04338 YCF1YDR135C 4548 nt4.45□□□□□ -1.7
VTI1Q04338 GVP36YIL041W 981 nt4.45□□□□□ -1.7
VTI1Q04338 YLR428CYLR428C 345 nt4.45□□□□□ -1.7
VTI1Q04338 SNO1YMR095C 675 nt4.45□□□□□ -1.7
VTI1Q04338 WHI4YDL224C 1950 nt4.45□□□□□ -1.7
VTI1Q04338 GLO3YER122C 1482 nt4.44□□□□□ -1.7
VTI1Q04338 YPL077CYPL077C 723 nt4.44□□□□□ -1.7
VTI1Q04338 YBR103C-AYBR103C-A 144 nt4.44□□□□□ -1.7
VTI1Q04338 STB3YDR169C 1542 nt4.44□□□□□ -1.7
VTI1Q04338 SEG1YMR086W 2883 nt4.44□□□□□ -1.7
VTI1Q04338 YPK9YOR291W 4419 nt4.44□□□□□ -1.7
VTI1Q04338 VPS45YGL095C 1734 nt4.43□□□□□ -1.7
VTI1Q04338 YLR345WYLR345W 1530 nt4.43□□□□□ -1.7
VTI1Q04338 RPL14AYKL006W 417 nt4.43□□□□□ -1.7
VTI1Q04338 SPC34YKR037C 888 nt4.43□□□□□ -1.7
VTI1Q04338 FMP46YKR049C 402 nt4.43□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms