Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HSPG2P98160 AC141586.4-201ENST00000624558 1573 ntBASIC14.04□□□□□ -0.16
HSPG2P98160 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.04□□□□□ -0.16
HSPG2P98160 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.04□□□□□ -0.16
HSPG2P98160 DUX4L16-201ENST00000555130 1264 ntBASIC14.04□□□□□ -0.16
HSPG2P98160 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HSPG2P98160 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HSPG2P98160 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HSPG2P98160 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HSPG2P98160 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HSPG2P98160 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HSPG2P98160 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.04□□□□□ -0.16
HSPG2P98160 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.04□□□□□ -0.16
HSPG2P98160 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HSPG2P98160 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HSPG2P98160 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HSPG2P98160 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.04□□□□□ -0.16
HSPG2P98160 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.04□□□□□ -0.16
HSPG2P98160 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HSPG2P98160 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HSPG2P98160 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HSPG2P98160 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HSPG2P98160 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.03□□□□□ -0.16
HSPG2P98160 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HSPG2P98160 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC14.03□□□□□ -0.16
HSPG2P98160 FAM201B-201ENST00000458407 597 ntBASIC14.03□□□□□ -0.16
HSPG2P98160 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HSPG2P98160 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HSPG2P98160 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.03□□□□□ -0.16
HSPG2P98160 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HSPG2P98160 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HSPG2P98160 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HSPG2P98160 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HSPG2P98160 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.02□□□□□ -0.16
HSPG2P98160 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HSPG2P98160 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
HSPG2P98160 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HSPG2P98160 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HSPG2P98160 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HSPG2P98160 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
HSPG2P98160 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.02□□□□□ -0.16
HSPG2P98160 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HSPG2P98160 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HSPG2P98160 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HSPG2P98160 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
HSPG2P98160 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HSPG2P98160 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.02□□□□□ -0.17
HSPG2P98160 AC231657.2-201ENST00000624556 255 ntBASIC14.02□□□□□ -0.17
HSPG2P98160 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HSPG2P98160 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC14.02□□□□□ -0.17
HSPG2P98160 UBE2DNL-204ENST00000602536 740 ntBASIC14.01□□□□□ -0.17
HSPG2P98160 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HSPG2P98160 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC14.01□□□□□ -0.17
HSPG2P98160 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HSPG2P98160 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HSPG2P98160 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HSPG2P98160 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HSPG2P98160 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.01□□□□□ -0.17
HSPG2P98160 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HSPG2P98160 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.01□□□□□ -0.17
HSPG2P98160 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC14.01□□□□□ -0.17
HSPG2P98160 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HSPG2P98160 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HSPG2P98160 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14□□□□□ -0.17
HSPG2P98160 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HSPG2P98160 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14□□□□□ -0.17
HSPG2P98160 AC211429.1-201ENST00000415277 523 ntBASIC14□□□□□ -0.17
HSPG2P98160 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14□□□□□ -0.17
HSPG2P98160 MARS-234ENST00000630571 216 ntTSL 5 BASIC14□□□□□ -0.17
HSPG2P98160 MARS-235ENST00000630803 183 ntTSL 3 BASIC14□□□□□ -0.17
HSPG2P98160 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
HSPG2P98160 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 MAX-217ENST00000557277 728 ntTSL 3 BASIC14□□□□□ -0.17
HSPG2P98160 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HSPG2P98160 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HSPG2P98160 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HSPG2P98160 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HSPG2P98160 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HSPG2P98160 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HSPG2P98160 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC13.99□□□□□ -0.17
HSPG2P98160 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HSPG2P98160 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HSPG2P98160 FAM210CP-201ENST00000445714 574 ntBASIC13.99□□□□□ -0.17
HSPG2P98160 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HSPG2P98160 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC13.99□□□□□ -0.17
HSPG2P98160 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.99□□□□□ -0.17
HSPG2P98160 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HSPG2P98160 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HSPG2P98160 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HSPG2P98160 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms