Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPXP78539 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.32■□□□□ 0.52
SRPXP78539 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPXP78539 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPXP78539 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SRPXP78539 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.32■□□□□ 0.52
SRPXP78539 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SRPXP78539 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SRPXP78539 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPXP78539 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SRPXP78539 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SRPXP78539 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPXP78539 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.31■□□□□ 0.52
SRPXP78539 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRPXP78539 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.31■□□□□ 0.52
SRPXP78539 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.31■□□□□ 0.52
SRPXP78539 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.31■□□□□ 0.52
SRPXP78539 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRPXP78539 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SRPXP78539 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SRPXP78539 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SRPXP78539 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPXP78539 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.3■□□□□ 0.52
SRPXP78539 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPXP78539 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRPXP78539 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPXP78539 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPXP78539 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRPXP78539 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.3■□□□□ 0.52
SRPXP78539 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.3■□□□□ 0.52
SRPXP78539 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPXP78539 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPXP78539 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPXP78539 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRPXP78539 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPXP78539 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SRPXP78539 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.29■□□□□ 0.52
SRPXP78539 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.29■□□□□ 0.52
SRPXP78539 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SRPXP78539 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.29■□□□□ 0.52
SRPXP78539 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRPXP78539 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRPXP78539 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRPXP78539 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRPXP78539 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRPXP78539 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.28■□□□□ 0.52
SRPXP78539 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SRPXP78539 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRPXP78539 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRPXP78539 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRPXP78539 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRPXP78539 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRPXP78539 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRPXP78539 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRPXP78539 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRPXP78539 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRPXP78539 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SRPXP78539 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SRPXP78539 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.27■□□□□ 0.52
SRPXP78539 MIR6765-201ENST00000614092 87 ntBASIC18.27■□□□□ 0.52
SRPXP78539 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SRPXP78539 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRPXP78539 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
SRPXP78539 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRPXP78539 AL353803.4-201ENST00000565882 1934 ntBASIC18.26■□□□□ 0.51
SRPXP78539 GPX1-201ENST00000419349 1106 ntBASIC18.26■□□□□ 0.51
SRPXP78539 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SRPXP78539 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SRPXP78539 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.26■□□□□ 0.51
SRPXP78539 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SRPXP78539 AL024507.2-201ENST00000606070 2574 ntBASIC18.26■□□□□ 0.51
SRPXP78539 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRPXP78539 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRPXP78539 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRPXP78539 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.25■□□□□ 0.51
SRPXP78539 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SRPXP78539 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SRPXP78539 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRPXP78539 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRPXP78539 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.25■□□□□ 0.51
SRPXP78539 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
SRPXP78539 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.25■□□□□ 0.51
SRPXP78539 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRPXP78539 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRPXP78539 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRPXP78539 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRPXP78539 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.25■□□□□ 0.51
SRPXP78539 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRPXP78539 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRPXP78539 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRPXP78539 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRPXP78539 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRPXP78539 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRPXP78539 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.24■□□□□ 0.51
SRPXP78539 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
SRPXP78539 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SRPXP78539 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRPXP78539 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SRPXP78539 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SRPXP78539 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms