Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPP38P78345 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPP38P78345 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPP38P78345 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RPP38P78345 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RPP38P78345 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RPP38P78345 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPP38P78345 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.94■□□□□ 0.94
RPP38P78345 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.94■□□□□ 0.94
RPP38P78345 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPP38P78345 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPP38P78345 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPP38P78345 LINC00526-201ENST00000581067 1875 ntBASIC20.94■□□□□ 0.94
RPP38P78345 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPP38P78345 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPP38P78345 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.93■□□□□ 0.94
RPP38P78345 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPP38P78345 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPP38P78345 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPP38P78345 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPP38P78345 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.93■□□□□ 0.94
RPP38P78345 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.93■□□□□ 0.94
RPP38P78345 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.93■□□□□ 0.94
RPP38P78345 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPP38P78345 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPP38P78345 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPP38P78345 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPP38P78345 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPP38P78345 ALDH1A3-203ENST00000557963 1670 ntBASIC20.93■□□□□ 0.94
RPP38P78345 GUSBP5-202ENST00000510805 1989 ntBASIC20.92■□□□□ 0.94
RPP38P78345 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RPP38P78345 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.92■□□□□ 0.94
RPP38P78345 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.92■□□□□ 0.94
RPP38P78345 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.92■□□□□ 0.94
RPP38P78345 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.92■□□□□ 0.94
RPP38P78345 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPP38P78345 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RPP38P78345 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPP38P78345 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPP38P78345 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
RPP38P78345 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPP38P78345 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPP38P78345 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPP38P78345 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPP38P78345 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPP38P78345 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPP38P78345 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
RPP38P78345 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.91■□□□□ 0.94
RPP38P78345 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.91■□□□□ 0.94
RPP38P78345 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPP38P78345 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPP38P78345 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
RPP38P78345 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.91■□□□□ 0.94
RPP38P78345 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPP38P78345 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RPP38P78345 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPP38P78345 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RPP38P78345 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPP38P78345 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RPP38P78345 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.9■□□□□ 0.94
RPP38P78345 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPP38P78345 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
RPP38P78345 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
RPP38P78345 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPP38P78345 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPP38P78345 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.9■□□□□ 0.94
RPP38P78345 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.9■□□□□ 0.94
RPP38P78345 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.89■□□□□ 0.94
RPP38P78345 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPP38P78345 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPP38P78345 AC008406.3-201ENST00000620001 1374 ntBASIC20.89■□□□□ 0.93
RPP38P78345 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPP38P78345 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RPP38P78345 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.89■□□□□ 0.93
RPP38P78345 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.89■□□□□ 0.93
RPP38P78345 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPP38P78345 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.89■□□□□ 0.93
RPP38P78345 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPP38P78345 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPP38P78345 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPP38P78345 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPP38P78345 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.88■□□□□ 0.93
RPP38P78345 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPP38P78345 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.88■□□□□ 0.93
RPP38P78345 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPP38P78345 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPP38P78345 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RPP38P78345 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.88■□□□□ 0.93
RPP38P78345 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPP38P78345 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.88■□□□□ 0.93
RPP38P78345 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.88■□□□□ 0.93
RPP38P78345 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPP38P78345 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPP38P78345 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
RPP38P78345 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPP38P78345 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RPP38P78345 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPP38P78345 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPP38P78345 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.87■□□□□ 0.93
RPP38P78345 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms