Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.73■■□□□ 1.07
YBX1P67809 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
YBX1P67809 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YBX1P67809 DUSP8P3-201ENST00000399571 1760 ntBASIC21.73■■□□□ 1.07
YBX1P67809 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
YBX1P67809 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.73■■□□□ 1.07
YBX1P67809 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
YBX1P67809 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
YBX1P67809 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.72■■□□□ 1.07
YBX1P67809 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.72■■□□□ 1.07
YBX1P67809 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
YBX1P67809 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
YBX1P67809 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
YBX1P67809 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
YBX1P67809 LINC00565-201ENST00000562710 2331 ntBASIC21.72■■□□□ 1.07
YBX1P67809 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
YBX1P67809 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
YBX1P67809 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YBX1P67809 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
YBX1P67809 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
YBX1P67809 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
YBX1P67809 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.71■■□□□ 1.07
YBX1P67809 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YBX1P67809 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YBX1P67809 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
YBX1P67809 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
YBX1P67809 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
YBX1P67809 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.7■■□□□ 1.06
YBX1P67809 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
YBX1P67809 AC079630.1-202ENST00000618127 1840 ntBASIC21.7■■□□□ 1.06
YBX1P67809 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.7■■□□□ 1.06
YBX1P67809 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
YBX1P67809 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
YBX1P67809 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
YBX1P67809 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YBX1P67809 AC092068.2-201ENST00000590491 1708 ntBASIC21.69■■□□□ 1.06
YBX1P67809 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
YBX1P67809 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
YBX1P67809 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.69■■□□□ 1.06
YBX1P67809 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YBX1P67809 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
YBX1P67809 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
YBX1P67809 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YBX1P67809 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
YBX1P67809 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
YBX1P67809 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
YBX1P67809 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
YBX1P67809 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.68■■□□□ 1.06
YBX1P67809 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
YBX1P67809 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.68■■□□□ 1.06
YBX1P67809 C17orf82-201ENST00000623772 1530 ntBASIC21.68■■□□□ 1.06
YBX1P67809 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.68■■□□□ 1.06
YBX1P67809 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
YBX1P67809 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
YBX1P67809 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
YBX1P67809 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
YBX1P67809 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
YBX1P67809 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.67■■□□□ 1.06
YBX1P67809 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.67■■□□□ 1.06
YBX1P67809 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.67■■□□□ 1.06
YBX1P67809 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
YBX1P67809 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
YBX1P67809 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
YBX1P67809 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.67■■□□□ 1.06
YBX1P67809 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
YBX1P67809 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
YBX1P67809 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YBX1P67809 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
YBX1P67809 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
YBX1P67809 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
YBX1P67809 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
YBX1P67809 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YBX1P67809 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YBX1P67809 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
YBX1P67809 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
YBX1P67809 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
YBX1P67809 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
YBX1P67809 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
YBX1P67809 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YBX1P67809 AL136116.3-201ENST00000402907 1138 ntBASIC21.65■■□□□ 1.06
YBX1P67809 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.65■■□□□ 1.06
YBX1P67809 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YBX1P67809 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.65■■□□□ 1.06
YBX1P67809 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YBX1P67809 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
YBX1P67809 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
YBX1P67809 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.64■■□□□ 1.06
YBX1P67809 AC008406.3-201ENST00000620001 1374 ntBASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms