Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
LSM6P62312 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LSM6P62312 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM6P62312 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.51■□□□□ 0.71
LSM6P62312 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.51■□□□□ 0.71
LSM6P62312 AC233723.2-201ENST00000623798 2106 ntBASIC19.51■□□□□ 0.71
LSM6P62312 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM6P62312 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM6P62312 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.51■□□□□ 0.71
LSM6P62312 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.51■□□□□ 0.71
LSM6P62312 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.51■□□□□ 0.71
LSM6P62312 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM6P62312 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.51■□□□□ 0.71
LSM6P62312 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM6P62312 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.51■□□□□ 0.71
LSM6P62312 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM6P62312 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM6P62312 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM6P62312 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM6P62312 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.5■□□□□ 0.71
LSM6P62312 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM6P62312 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM6P62312 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM6P62312 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.5■□□□□ 0.71
LSM6P62312 AL356740.2-201ENST00000601559 647 ntBASIC19.5■□□□□ 0.71
LSM6P62312 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LSM6P62312 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM6P62312 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM6P62312 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM6P62312 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM6P62312 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM6P62312 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.49■□□□□ 0.71
LSM6P62312 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM6P62312 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LSM6P62312 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM6P62312 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.49■□□□□ 0.71
LSM6P62312 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM6P62312 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LSM6P62312 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM6P62312 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.49■□□□□ 0.71
LSM6P62312 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LSM6P62312 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM6P62312 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM6P62312 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM6P62312 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM6P62312 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM6P62312 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LSM6P62312 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LSM6P62312 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.48■□□□□ 0.71
LSM6P62312 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM6P62312 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM6P62312 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.48■□□□□ 0.71
LSM6P62312 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LSM6P62312 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LSM6P62312 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM6P62312 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LSM6P62312 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.48■□□□□ 0.71
LSM6P62312 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.48■□□□□ 0.71
LSM6P62312 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LSM6P62312 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.48■□□□□ 0.71
LSM6P62312 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM6P62312 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM6P62312 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM6P62312 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.48■□□□□ 0.71
LSM6P62312 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM6P62312 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM6P62312 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.47■□□□□ 0.71
LSM6P62312 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LSM6P62312 AL117328.2-201ENST00000624617 1940 ntBASIC19.47■□□□□ 0.71
LSM6P62312 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LSM6P62312 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
LSM6P62312 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM6P62312 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.47■□□□□ 0.71
LSM6P62312 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.47■□□□□ 0.71
LSM6P62312 MIR3621-201ENST00000580529 85 ntBASIC19.47■□□□□ 0.71
LSM6P62312 AC241377.3-202ENST00000626088 1088 ntBASIC19.47■□□□□ 0.71
LSM6P62312 AC241585.3-202ENST00000628937 1088 ntBASIC19.47■□□□□ 0.71
LSM6P62312 AC245100.8-202ENST00000629247 1058 ntBASIC19.47■□□□□ 0.71
LSM6P62312 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM6P62312 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM6P62312 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.47■□□□□ 0.71
LSM6P62312 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.47■□□□□ 0.71
LSM6P62312 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LSM6P62312 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LSM6P62312 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM6P62312 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LSM6P62312 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM6P62312 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM6P62312 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LSM6P62312 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM6P62312 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.46■□□□□ 0.71
LSM6P62312 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM6P62312 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM6P62312 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LSM6P62312 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
LSM6P62312 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LSM6P62312 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.45■□□□□ 0.7
LSM6P62312 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM6P62312 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM6P62312 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms