Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
UBE2NP61088 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.5■□□□□ 0.71
UBE2NP61088 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2NP61088 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.49■□□□□ 0.71
UBE2NP61088 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.49■□□□□ 0.71
UBE2NP61088 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2NP61088 MIR3181-201ENST00000578512 73 ntBASIC19.49■□□□□ 0.71
UBE2NP61088 AC011298.3-201ENST00000615796 283 ntBASIC19.49■□□□□ 0.71
UBE2NP61088 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2NP61088 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2NP61088 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2NP61088 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2NP61088 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2NP61088 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE2NP61088 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE2NP61088 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.48■□□□□ 0.71
UBE2NP61088 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.48■□□□□ 0.71
UBE2NP61088 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.48■□□□□ 0.71
UBE2NP61088 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE2NP61088 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.48■□□□□ 0.71
UBE2NP61088 AC024257.2-201ENST00000549699 147 ntBASIC19.48■□□□□ 0.71
UBE2NP61088 AC106739.1-201ENST00000617035 715 ntBASIC19.48■□□□□ 0.71
UBE2NP61088 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
UBE2NP61088 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.48■□□□□ 0.71
UBE2NP61088 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE2NP61088 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBE2NP61088 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBE2NP61088 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.48■□□□□ 0.71
UBE2NP61088 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
UBE2NP61088 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.47■□□□□ 0.71
UBE2NP61088 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE2NP61088 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE2NP61088 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE2NP61088 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE2NP61088 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE2NP61088 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.47■□□□□ 0.71
UBE2NP61088 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.47■□□□□ 0.71
UBE2NP61088 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.47■□□□□ 0.71
UBE2NP61088 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
UBE2NP61088 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.47■□□□□ 0.71
UBE2NP61088 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBE2NP61088 AL353803.4-201ENST00000565882 1934 ntBASIC19.47■□□□□ 0.71
UBE2NP61088 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE2NP61088 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE2NP61088 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE2NP61088 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE2NP61088 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UBE2NP61088 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE2NP61088 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE2NP61088 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE2NP61088 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE2NP61088 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.46■□□□□ 0.71
UBE2NP61088 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
UBE2NP61088 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.46■□□□□ 0.71
UBE2NP61088 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBE2NP61088 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE2NP61088 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE2NP61088 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE2NP61088 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE2NP61088 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
UBE2NP61088 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE2NP61088 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE2NP61088 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE2NP61088 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE2NP61088 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
UBE2NP61088 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE2NP61088 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE2NP61088 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBE2NP61088 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.45■□□□□ 0.7
UBE2NP61088 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE2NP61088 AC092068.2-201ENST00000590491 1708 ntBASIC19.45■□□□□ 0.7
UBE2NP61088 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UBE2NP61088 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE2NP61088 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE2NP61088 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
UBE2NP61088 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
UBE2NP61088 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UBE2NP61088 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
UBE2NP61088 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.44■□□□□ 0.7
UBE2NP61088 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2NP61088 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE2NP61088 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2NP61088 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2NP61088 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.44■□□□□ 0.7
UBE2NP61088 AC136469.2-201ENST00000623944 1028 ntBASIC19.44■□□□□ 0.7
UBE2NP61088 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.44■□□□□ 0.7
UBE2NP61088 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2NP61088 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.44■□□□□ 0.7
UBE2NP61088 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
UBE2NP61088 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE2NP61088 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2NP61088 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2NP61088 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UBE2NP61088 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2NP61088 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE2NP61088 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UBE2NP61088 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
UBE2NP61088 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE2NP61088 AC133637.1-201ENST00000624115 1537 ntBASIC19.43■□□□□ 0.7
UBE2NP61088 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms