Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S2P59780 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S2P59780 RP9P-202ENST00000450133 1212 ntBASIC19.07■□□□□ 0.64
AP3S2P59780 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.07■□□□□ 0.64
AP3S2P59780 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.07■□□□□ 0.64
AP3S2P59780 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S2P59780 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S2P59780 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP3S2P59780 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S2P59780 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3S2P59780 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.06■□□□□ 0.64
AP3S2P59780 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S2P59780 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.06■□□□□ 0.64
AP3S2P59780 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S2P59780 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
AP3S2P59780 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S2P59780 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3S2P59780 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
AP3S2P59780 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.06■□□□□ 0.64
AP3S2P59780 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
AP3S2P59780 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S2P59780 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S2P59780 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S2P59780 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
AP3S2P59780 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S2P59780 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
AP3S2P59780 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S2P59780 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.05■□□□□ 0.64
AP3S2P59780 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.05■□□□□ 0.64
AP3S2P59780 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.05■□□□□ 0.64
AP3S2P59780 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S2P59780 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.05■□□□□ 0.64
AP3S2P59780 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S2P59780 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
AP3S2P59780 AC026310.3-201ENST00000625186 2373 ntBASIC19.05■□□□□ 0.64
AP3S2P59780 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3S2P59780 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S2P59780 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S2P59780 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
AP3S2P59780 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
AP3S2P59780 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.04■□□□□ 0.64
AP3S2P59780 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
AP3S2P59780 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S2P59780 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S2P59780 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S2P59780 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3S2P59780 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
AP3S2P59780 ALDH1A3-203ENST00000557963 1670 ntBASIC19.04■□□□□ 0.64
AP3S2P59780 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
AP3S2P59780 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
AP3S2P59780 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
AP3S2P59780 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.03■□□□□ 0.64
AP3S2P59780 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S2P59780 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S2P59780 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S2P59780 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.03■□□□□ 0.64
AP3S2P59780 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
AP3S2P59780 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
AP3S2P59780 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.03■□□□□ 0.64
AP3S2P59780 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S2P59780 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S2P59780 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3S2P59780 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.03■□□□□ 0.64
AP3S2P59780 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
AP3S2P59780 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP3S2P59780 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.02■□□□□ 0.64
AP3S2P59780 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP3S2P59780 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.02■□□□□ 0.64
AP3S2P59780 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.02■□□□□ 0.64
AP3S2P59780 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP3S2P59780 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP3S2P59780 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP3S2P59780 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP3S2P59780 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP3S2P59780 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
AP3S2P59780 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP3S2P59780 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
AP3S2P59780 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP3S2P59780 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP3S2P59780 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP3S2P59780 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.01■□□□□ 0.63
AP3S2P59780 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.01■□□□□ 0.63
AP3S2P59780 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.01■□□□□ 0.63
AP3S2P59780 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.01■□□□□ 0.63
AP3S2P59780 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 AC093536.1-201ENST00000569153 554 ntBASIC19.01■□□□□ 0.63
AP3S2P59780 AC079630.1-202ENST00000618127 1840 ntBASIC19.01■□□□□ 0.63
AP3S2P59780 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 AL121603.2-201ENST00000557373 2117 ntBASIC19.01■□□□□ 0.63
AP3S2P59780 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S2P59780 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
AP3S2P59780 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
AP3S2P59780 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms