Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDH13P55290 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDH13P55290 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH13P55290 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH13P55290 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH13P55290 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH13P55290 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH13P55290 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH13P55290 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH13P55290 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CDH13P55290 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH13P55290 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH13P55290 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH13P55290 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDH13P55290 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDH13P55290 CLDN5-201ENST00000403084 2357 ntBASIC21.7■■□□□ 1.07
CDH13P55290 ESRRAP2-201ENST00000418437 1549 ntBASIC21.7■■□□□ 1.07
CDH13P55290 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.7■■□□□ 1.07
CDH13P55290 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
CDH13P55290 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH13P55290 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH13P55290 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH13P55290 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH13P55290 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH13P55290 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH13P55290 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CDH13P55290 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH13P55290 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH13P55290 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.7■■□□□ 1.06
CDH13P55290 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH13P55290 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH13P55290 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH13P55290 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH13P55290 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH13P55290 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDH13P55290 MIR6722-201ENST00000617286 78 ntBASIC21.69■■□□□ 1.06
CDH13P55290 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH13P55290 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDH13P55290 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH13P55290 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.68■■□□□ 1.06
CDH13P55290 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH13P55290 BX664725.1-201ENST00000438252 379 ntBASIC21.68■■□□□ 1.06
CDH13P55290 AC005703.6-201ENST00000623265 1329 ntBASIC21.68■■□□□ 1.06
CDH13P55290 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH13P55290 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH13P55290 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CDH13P55290 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.68■■□□□ 1.06
CDH13P55290 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CDH13P55290 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH13P55290 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CDH13P55290 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDH13P55290 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH13P55290 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH13P55290 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH13P55290 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH13P55290 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH13P55290 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH13P55290 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDH13P55290 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
CDH13P55290 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH13P55290 AC242852.2-201ENST00000615738 1807 ntBASIC21.66■■□□□ 1.06
CDH13P55290 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDH13P55290 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH13P55290 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH13P55290 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH13P55290 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH13P55290 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH13P55290 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH13P55290 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CDH13P55290 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH13P55290 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH13P55290 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH13P55290 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH13P55290 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH13P55290 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH13P55290 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.65■■□□□ 1.06
CDH13P55290 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDH13P55290 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.65■■□□□ 1.06
CDH13P55290 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH13P55290 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH13P55290 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH13P55290 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH13P55290 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH13P55290 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH13P55290 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CDH13P55290 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.64■■□□□ 1.06
CDH13P55290 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CDH13P55290 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH13P55290 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.64■■□□□ 1.06
CDH13P55290 AC127496.7-201ENST00000625110 1798 ntBASIC21.64■■□□□ 1.06
CDH13P55290 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDH13P55290 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH13P55290 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH13P55290 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDH13P55290 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.64■■□□□ 1.05
CDH13P55290 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH13P55290 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH13P55290 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH13P55290 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms