Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PSMD4P55036 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMD4P55036 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMD4P55036 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMD4P55036 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMD4P55036 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PSMD4P55036 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PSMD4P55036 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMD4P55036 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.62■□□□□ 0.89
PSMD4P55036 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.62■□□□□ 0.89
PSMD4P55036 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
PSMD4P55036 AC068473.5-201ENST00000616428 2072 ntBASIC20.62■□□□□ 0.89
PSMD4P55036 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.62■□□□□ 0.89
PSMD4P55036 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.62■□□□□ 0.89
PSMD4P55036 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMD4P55036 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.62■□□□□ 0.89
PSMD4P55036 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.62■□□□□ 0.89
PSMD4P55036 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PSMD4P55036 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PSMD4P55036 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.62■□□□□ 0.89
PSMD4P55036 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMD4P55036 AL353803.4-201ENST00000565882 1934 ntBASIC20.62■□□□□ 0.89
PSMD4P55036 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PSMD4P55036 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
PSMD4P55036 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMD4P55036 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMD4P55036 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.62■□□□□ 0.89
PSMD4P55036 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
PSMD4P55036 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.61■□□□□ 0.89
PSMD4P55036 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PSMD4P55036 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PSMD4P55036 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PSMD4P55036 SRD5A1P1-201ENST00000442297 786 ntBASIC20.61■□□□□ 0.89
PSMD4P55036 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.61■□□□□ 0.89
PSMD4P55036 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.61■□□□□ 0.89
PSMD4P55036 AC092171.4-201ENST00000609130 632 ntBASIC20.61■□□□□ 0.89
PSMD4P55036 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PSMD4P55036 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PSMD4P55036 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PSMD4P55036 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PSMD4P55036 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PSMD4P55036 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PSMD4P55036 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.6■□□□□ 0.89
PSMD4P55036 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMD4P55036 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PSMD4P55036 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PSMD4P55036 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.6■□□□□ 0.89
PSMD4P55036 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMD4P55036 DUX4L4-201ENST00000566884 1269 ntBASIC20.6■□□□□ 0.89
PSMD4P55036 AC131212.1-201ENST00000613771 668 ntBASIC20.6■□□□□ 0.89
PSMD4P55036 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.6■□□□□ 0.89
PSMD4P55036 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PSMD4P55036 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.6■□□□□ 0.89
PSMD4P55036 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMD4P55036 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PSMD4P55036 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.6■□□□□ 0.89
PSMD4P55036 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMD4P55036 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.6■□□□□ 0.89
PSMD4P55036 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PSMD4P55036 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PSMD4P55036 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PSMD4P55036 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PSMD4P55036 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMD4P55036 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.59■□□□□ 0.89
PSMD4P55036 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.59■□□□□ 0.89
PSMD4P55036 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PSMD4P55036 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PSMD4P55036 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.59■□□□□ 0.89
PSMD4P55036 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSMD4P55036 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PSMD4P55036 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.58■□□□□ 0.89
PSMD4P55036 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PSMD4P55036 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.58■□□□□ 0.89
PSMD4P55036 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.58■□□□□ 0.89
PSMD4P55036 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.58■□□□□ 0.89
PSMD4P55036 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.58■□□□□ 0.89
PSMD4P55036 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
PSMD4P55036 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.58■□□□□ 0.88
PSMD4P55036 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMD4P55036 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.57■□□□□ 0.88
PSMD4P55036 AC009086.3-201ENST00000623486 1008 ntBASIC20.57■□□□□ 0.88
PSMD4P55036 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PSMD4P55036 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.56■□□□□ 0.88
PSMD4P55036 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSMD4P55036 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSMD4P55036 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PSMD4P55036 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
PSMD4P55036 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSMD4P55036 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.56■□□□□ 0.88
PSMD4P55036 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PSMD4P55036 AL512631.2-201ENST00000604634 923 ntBASIC20.56■□□□□ 0.88
PSMD4P55036 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.56■□□□□ 0.88
PSMD4P55036 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.56■□□□□ 0.88
PSMD4P55036 PKD1P6-201ENST00000343738 4769 ntBASIC20.56■□□□□ 0.88
PSMD4P55036 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSMD4P55036 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PSMD4P55036 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PSMD4P55036 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.55■□□□□ 0.88
PSMD4P55036 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PSMD4P55036 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms