Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.59■□□□□ 0.89
ATRXP46100 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
ATRXP46100 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.59■□□□□ 0.89
ATRXP46100 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATRXP46100 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.59■□□□□ 0.89
ATRXP46100 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATRXP46100 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.59■□□□□ 0.89
ATRXP46100 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATRXP46100 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATRXP46100 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.59■□□□□ 0.89
ATRXP46100 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.59■□□□□ 0.89
ATRXP46100 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ATRXP46100 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATRXP46100 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATRXP46100 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ATRXP46100 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.58■□□□□ 0.89
ATRXP46100 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.58■□□□□ 0.88
ATRXP46100 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATRXP46100 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATRXP46100 KRT18P11-201ENST00000435214 1283 ntBASIC20.58■□□□□ 0.88
ATRXP46100 KRT18P21-201ENST00000515767 1272 ntBASIC20.58■□□□□ 0.88
ATRXP46100 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATRXP46100 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATRXP46100 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.57■□□□□ 0.88
ATRXP46100 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATRXP46100 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATRXP46100 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATRXP46100 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATRXP46100 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.57■□□□□ 0.88
ATRXP46100 RNA5SP413-201ENST00000516373 109 ntBASIC20.57■□□□□ 0.88
ATRXP46100 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATRXP46100 MFSD11-216ENST00000590393 1141 ntBASIC20.57■□□□□ 0.88
ATRXP46100 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.57■□□□□ 0.88
ATRXP46100 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATRXP46100 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATRXP46100 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.56■□□□□ 0.88
ATRXP46100 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.56■□□□□ 0.88
ATRXP46100 AC010525.1-201ENST00000585559 441 ntBASIC20.56■□□□□ 0.88
ATRXP46100 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATRXP46100 AL022069.1-201ENST00000568025 1636 ntBASIC20.56■□□□□ 0.88
ATRXP46100 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.56■□□□□ 0.88
ATRXP46100 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATRXP46100 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ATRXP46100 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATRXP46100 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATRXP46100 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
ATRXP46100 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATRXP46100 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.55■□□□□ 0.88
ATRXP46100 SLC7A5P1-201ENST00000568957 537 ntBASIC20.55■□□□□ 0.88
ATRXP46100 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATRXP46100 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.55■□□□□ 0.88
ATRXP46100 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ATRXP46100 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
ATRXP46100 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.55■□□□□ 0.88
ATRXP46100 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.55■□□□□ 0.88
ATRXP46100 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.55■□□□□ 0.88
ATRXP46100 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.54■□□□□ 0.88
ATRXP46100 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.54■□□□□ 0.88
ATRXP46100 AL121832.2-201ENST00000610979 668 ntBASIC20.54■□□□□ 0.88
ATRXP46100 AC011767.1-201ENST00000617410 1153 ntBASIC20.54■□□□□ 0.88
ATRXP46100 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.54■□□□□ 0.88
ATRXP46100 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATRXP46100 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.54■□□□□ 0.88
ATRXP46100 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ATRXP46100 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATRXP46100 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATRXP46100 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.53■□□□□ 0.88
ATRXP46100 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATRXP46100 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ATRXP46100 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATRXP46100 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.53■□□□□ 0.88
ATRXP46100 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.53■□□□□ 0.88
ATRXP46100 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATRXP46100 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.53■□□□□ 0.88
ATRXP46100 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATRXP46100 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.53■□□□□ 0.88
ATRXP46100 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ATRXP46100 UNC93B4-201ENST00000505679 747 ntBASIC20.52■□□□□ 0.88
ATRXP46100 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATRXP46100 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATRXP46100 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.52■□□□□ 0.88
ATRXP46100 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATRXP46100 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ATRXP46100 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATRXP46100 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATRXP46100 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.52■□□□□ 0.88
ATRXP46100 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ATRXP46100 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.52■□□□□ 0.88
ATRXP46100 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATRXP46100 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.52■□□□□ 0.88
ATRXP46100 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATRXP46100 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATRXP46100 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.51■□□□□ 0.87
ATRXP46100 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATRXP46100 AC142381.4-202ENST00000563973 229 ntBASIC20.51■□□□□ 0.87
ATRXP46100 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATRXP46100 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.51■□□□□ 0.87
ATRXP46100 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATRXP46100 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATRXP46100 KRT19P1-201ENST00000405746 1186 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms