Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.01■□□□□ 0.95
KRT20P35900 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.01■□□□□ 0.95
KRT20P35900 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
KRT20P35900 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT20P35900 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT20P35900 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT20P35900 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21■□□□□ 0.95
KRT20P35900 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT20P35900 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT20P35900 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21■□□□□ 0.95
KRT20P35900 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT20P35900 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
KRT20P35900 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
KRT20P35900 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT20P35900 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT20P35900 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT20P35900 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KRT20P35900 MIR6724-1-201ENST00000616420 92 ntBASIC20.99■□□□□ 0.95
KRT20P35900 MIR6724-2-201ENST00000616483 92 ntBASIC20.99■□□□□ 0.95
KRT20P35900 MIR6724-4-201ENST00000617390 92 ntBASIC20.99■□□□□ 0.95
KRT20P35900 MIR6724-3-201ENST00000622482 92 ntBASIC20.99■□□□□ 0.95
KRT20P35900 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
KRT20P35900 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT20P35900 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
KRT20P35900 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT20P35900 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT20P35900 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT20P35900 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT20P35900 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
KRT20P35900 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT20P35900 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT20P35900 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT20P35900 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
KRT20P35900 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT20P35900 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.97■□□□□ 0.95
KRT20P35900 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT20P35900 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.97■□□□□ 0.95
KRT20P35900 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT20P35900 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.97■□□□□ 0.95
KRT20P35900 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT20P35900 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.97■□□□□ 0.95
KRT20P35900 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
KRT20P35900 C1orf229-201ENST00000623686 2258 ntBASIC20.97■□□□□ 0.95
KRT20P35900 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT20P35900 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT20P35900 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT20P35900 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT20P35900 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.96■□□□□ 0.95
KRT20P35900 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.96■□□□□ 0.95
KRT20P35900 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
KRT20P35900 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT20P35900 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
KRT20P35900 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.96■□□□□ 0.95
KRT20P35900 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
KRT20P35900 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
KRT20P35900 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
KRT20P35900 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT20P35900 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT20P35900 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT20P35900 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT20P35900 ANOS2P-203ENST00000472227 1816 ntBASIC20.95■□□□□ 0.94
KRT20P35900 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT20P35900 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT20P35900 AL356441.2-201ENST00000443009 864 ntBASIC20.95■□□□□ 0.94
KRT20P35900 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT20P35900 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
KRT20P35900 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT20P35900 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT20P35900 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT20P35900 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT20P35900 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT20P35900 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT20P35900 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT20P35900 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT20P35900 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT20P35900 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT20P35900 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT20P35900 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT20P35900 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT20P35900 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT20P35900 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT20P35900 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT20P35900 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT20P35900 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
KRT20P35900 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms