Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTR1EP28566 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HTR1EP28566 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HTR1EP28566 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HTR1EP28566 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HTR1EP28566 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.25■□□□□ 0.99
HTR1EP28566 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HTR1EP28566 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HTR1EP28566 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.25■□□□□ 0.99
HTR1EP28566 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HTR1EP28566 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HTR1EP28566 AC131274.2-201ENST00000580697 1507 ntBASIC21.24■□□□□ 0.99
HTR1EP28566 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.24■□□□□ 0.99
HTR1EP28566 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
HTR1EP28566 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTR1EP28566 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTR1EP28566 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.24■□□□□ 0.99
HTR1EP28566 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HTR1EP28566 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.24■□□□□ 0.99
HTR1EP28566 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HTR1EP28566 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTR1EP28566 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTR1EP28566 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTR1EP28566 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTR1EP28566 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
HTR1EP28566 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HTR1EP28566 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.24■□□□□ 0.99
HTR1EP28566 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.24■□□□□ 0.99
HTR1EP28566 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.24■□□□□ 0.99
HTR1EP28566 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTR1EP28566 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.24■□□□□ 0.99
HTR1EP28566 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTR1EP28566 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTR1EP28566 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HTR1EP28566 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HTR1EP28566 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.23■□□□□ 0.99
HTR1EP28566 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HTR1EP28566 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.23■□□□□ 0.99
HTR1EP28566 AC137630.3-201ENST00000607245 391 ntBASIC21.23■□□□□ 0.99
HTR1EP28566 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HTR1EP28566 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HTR1EP28566 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTR1EP28566 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTR1EP28566 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTR1EP28566 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTR1EP28566 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HTR1EP28566 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HTR1EP28566 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.22■□□□□ 0.99
HTR1EP28566 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HTR1EP28566 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.22■□□□□ 0.99
HTR1EP28566 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HTR1EP28566 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.22■□□□□ 0.99
HTR1EP28566 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
HTR1EP28566 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HTR1EP28566 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HTR1EP28566 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.21■□□□□ 0.99
HTR1EP28566 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.21■□□□□ 0.99
HTR1EP28566 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HTR1EP28566 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HTR1EP28566 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HTR1EP28566 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.21■□□□□ 0.99
HTR1EP28566 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HTR1EP28566 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HTR1EP28566 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HTR1EP28566 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HTR1EP28566 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HTR1EP28566 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HTR1EP28566 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HTR1EP28566 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.2■□□□□ 0.98
HTR1EP28566 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HTR1EP28566 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.2■□□□□ 0.98
HTR1EP28566 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.2■□□□□ 0.98
HTR1EP28566 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.2■□□□□ 0.98
HTR1EP28566 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.2■□□□□ 0.98
HTR1EP28566 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.2■□□□□ 0.98
HTR1EP28566 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HTR1EP28566 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HTR1EP28566 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HTR1EP28566 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HTR1EP28566 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.2■□□□□ 0.98
HTR1EP28566 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
HTR1EP28566 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.2■□□□□ 0.98
HTR1EP28566 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HTR1EP28566 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HTR1EP28566 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.19■□□□□ 0.98
HTR1EP28566 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTR1EP28566 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTR1EP28566 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.19■□□□□ 0.98
HTR1EP28566 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.19■□□□□ 0.98
HTR1EP28566 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.19■□□□□ 0.98
HTR1EP28566 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.19■□□□□ 0.98
HTR1EP28566 AC007375.3-201ENST00000600936 2314 ntBASIC21.19■□□□□ 0.98
HTR1EP28566 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTR1EP28566 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.19■□□□□ 0.98
HTR1EP28566 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTR1EP28566 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTR1EP28566 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HTR1EP28566 AC021242.3-201ENST00000607598 1377 ntBASIC21.19■□□□□ 0.98
HTR1EP28566 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTR1EP28566 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms