Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFSF4P23510 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TNFSF4P23510 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFSF4P23510 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF4P23510 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF4P23510 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF4P23510 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFSF4P23510 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF4P23510 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFSF4P23510 AL139246.5-201ENST00000606645 996 ntBASIC18.94■□□□□ 0.62
TNFSF4P23510 AL136162.1-201ENST00000607711 1078 ntBASIC18.94■□□□□ 0.62
TNFSF4P23510 pRNA.6-201ENST00000610482 90 ntBASIC18.94■□□□□ 0.62
TNFSF4P23510 pRNA.5-201ENST00000612139 90 ntBASIC18.94■□□□□ 0.62
TNFSF4P23510 pRNA.11-201ENST00000618423 90 ntBASIC18.94■□□□□ 0.62
TNFSF4P23510 pRNA.13-201ENST00000619112 90 ntBASIC18.94■□□□□ 0.62
TNFSF4P23510 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF4P23510 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF4P23510 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.93■□□□□ 0.62
TNFSF4P23510 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF4P23510 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TNFSF4P23510 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TNFSF4P23510 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF4P23510 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.93■□□□□ 0.62
TNFSF4P23510 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF4P23510 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF4P23510 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF4P23510 AC006455.2-201ENST00000429931 906 ntBASIC18.93■□□□□ 0.62
TNFSF4P23510 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF4P23510 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF4P23510 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.93■□□□□ 0.62
TNFSF4P23510 AC011298.3-201ENST00000615796 283 ntBASIC18.93■□□□□ 0.62
TNFSF4P23510 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TNFSF4P23510 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.93■□□□□ 0.62
TNFSF4P23510 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TNFSF4P23510 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF4P23510 AC135279.3-201ENST00000610945 1311 ntBASIC18.93■□□□□ 0.62
TNFSF4P23510 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF4P23510 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF4P23510 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TNFSF4P23510 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFSF4P23510 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF4P23510 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF4P23510 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF4P23510 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF4P23510 SERBP1P1-201ENST00000396021 1160 ntBASIC18.92■□□□□ 0.62
TNFSF4P23510 PBX2P1-201ENST00000493219 1291 ntBASIC18.92■□□□□ 0.62
TNFSF4P23510 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF4P23510 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFSF4P23510 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF4P23510 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TNFSF4P23510 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF4P23510 AC092068.2-201ENST00000590491 1708 ntBASIC18.91■□□□□ 0.62
TNFSF4P23510 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF4P23510 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF4P23510 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TNFSF4P23510 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF4P23510 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF4P23510 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.91■□□□□ 0.62
TNFSF4P23510 MIR3181-201ENST00000578512 73 ntBASIC18.91■□□□□ 0.62
TNFSF4P23510 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TNFSF4P23510 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TNFSF4P23510 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF4P23510 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TNFSF4P23510 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF4P23510 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TNFSF4P23510 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF4P23510 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TNFSF4P23510 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFSF4P23510 AL353803.4-201ENST00000565882 1934 ntBASIC18.9■□□□□ 0.62
TNFSF4P23510 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
TNFSF4P23510 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF4P23510 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFSF4P23510 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF4P23510 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFSF4P23510 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF4P23510 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF4P23510 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF4P23510 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF4P23510 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
TNFSF4P23510 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
TNFSF4P23510 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TNFSF4P23510 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.89■□□□□ 0.61
TNFSF4P23510 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF4P23510 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFSF4P23510 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
TNFSF4P23510 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF4P23510 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF4P23510 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF4P23510 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF4P23510 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.89■□□□□ 0.61
TNFSF4P23510 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.89■□□□□ 0.61
TNFSF4P23510 AC106739.1-201ENST00000617035 715 ntBASIC18.89■□□□□ 0.61
TNFSF4P23510 AC110285.6-201ENST00000617652 491 ntBASIC18.89■□□□□ 0.61
TNFSF4P23510 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.89■□□□□ 0.61
TNFSF4P23510 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TNFSF4P23510 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFSF4P23510 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF4P23510 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TNFSF4P23510 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFSF4P23510 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms