Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43DP0DP04 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43DP0DP04 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43DP0DP04 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.42■□□□□ 0.54
IGHV3-43DP0DP04 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 PKD1P6-201ENST00000343738 4769 ntBASIC18.41■□□□□ 0.54
IGHV3-43DP0DP04 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGHV3-43DP0DP04 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.4■□□□□ 0.54
IGHV3-43DP0DP04 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IGHV3-43DP0DP04 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.4■□□□□ 0.54
IGHV3-43DP0DP04 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
IGHV3-43DP0DP04 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGHV3-43DP0DP04 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGHV3-43DP0DP04 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGHV3-43DP0DP04 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.4■□□□□ 0.54
IGHV3-43DP0DP04 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGHV3-43DP0DP04 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
IGHV3-43DP0DP04 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
IGHV3-43DP0DP04 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
IGHV3-43DP0DP04 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
IGHV3-43DP0DP04 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
IGHV3-43DP0DP04 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV3-43DP0DP04 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV3-43DP0DP04 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV3-43DP0DP04 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV3-43DP0DP04 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
IGHV3-43DP0DP04 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV3-43DP0DP04 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV3-43DP0DP04 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.39■□□□□ 0.53
IGHV3-43DP0DP04 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV3-43DP0DP04 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV3-43DP0DP04 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 UNC93B8-201ENST00000511903 705 ntBASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 AL035685.1-201ENST00000636663 812 ntBASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 AL117328.2-201ENST00000624617 1940 ntBASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV3-43DP0DP04 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IGHV3-43DP0DP04 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IGHV3-43DP0DP04 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IGHV3-43DP0DP04 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IGHV3-43DP0DP04 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.36■□□□□ 0.53
IGHV3-43DP0DP04 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IGHV3-43DP0DP04 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.36■□□□□ 0.53
IGHV3-43DP0DP04 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.36■□□□□ 0.53
IGHV3-43DP0DP04 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.35■□□□□ 0.53
IGHV3-43DP0DP04 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms