Protein–RNA interactions for Protein: P0CG01

GKN3P, Gastrokine-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN3PP0CG01 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.44■□□□□ 0.86
GKN3PP0CG01 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GKN3PP0CG01 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.44■□□□□ 0.86
GKN3PP0CG01 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.44■□□□□ 0.86
GKN3PP0CG01 AL035685.1-201ENST00000636663 812 ntBASIC20.44■□□□□ 0.86
GKN3PP0CG01 AL117328.2-201ENST00000624617 1940 ntBASIC20.44■□□□□ 0.86
GKN3PP0CG01 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
GKN3PP0CG01 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GKN3PP0CG01 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GKN3PP0CG01 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GKN3PP0CG01 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GKN3PP0CG01 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GKN3PP0CG01 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
GKN3PP0CG01 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GKN3PP0CG01 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.43■□□□□ 0.86
GKN3PP0CG01 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.43■□□□□ 0.86
GKN3PP0CG01 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.43■□□□□ 0.86
GKN3PP0CG01 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GKN3PP0CG01 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.43■□□□□ 0.86
GKN3PP0CG01 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
GKN3PP0CG01 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.43■□□□□ 0.86
GKN3PP0CG01 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.43■□□□□ 0.86
GKN3PP0CG01 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GKN3PP0CG01 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GKN3PP0CG01 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
GKN3PP0CG01 AC009102.2-201ENST00000606772 1639 ntBASIC20.42■□□□□ 0.86
GKN3PP0CG01 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GKN3PP0CG01 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
GKN3PP0CG01 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GKN3PP0CG01 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GKN3PP0CG01 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
GKN3PP0CG01 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GKN3PP0CG01 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
GKN3PP0CG01 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
GKN3PP0CG01 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GKN3PP0CG01 LINC01529-204ENST00000636474 1715 ntBASIC20.41■□□□□ 0.86
GKN3PP0CG01 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.41■□□□□ 0.86
GKN3PP0CG01 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
GKN3PP0CG01 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.41■□□□□ 0.86
GKN3PP0CG01 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.41■□□□□ 0.86
GKN3PP0CG01 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.41■□□□□ 0.86
GKN3PP0CG01 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.41■□□□□ 0.86
GKN3PP0CG01 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GKN3PP0CG01 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GKN3PP0CG01 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GKN3PP0CG01 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GKN3PP0CG01 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GKN3PP0CG01 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GKN3PP0CG01 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GKN3PP0CG01 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GKN3PP0CG01 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GKN3PP0CG01 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.4■□□□□ 0.86
GKN3PP0CG01 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GKN3PP0CG01 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.4■□□□□ 0.86
GKN3PP0CG01 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GKN3PP0CG01 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
GKN3PP0CG01 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.39■□□□□ 0.86
GKN3PP0CG01 EP400NL-214ENST00000641289 2402 ntBASIC20.39■□□□□ 0.86
GKN3PP0CG01 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GKN3PP0CG01 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GKN3PP0CG01 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.39■□□□□ 0.85
GKN3PP0CG01 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GKN3PP0CG01 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GKN3PP0CG01 AC079834.2-201ENST00000609776 1949 ntBASIC20.39■□□□□ 0.85
GKN3PP0CG01 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GKN3PP0CG01 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GKN3PP0CG01 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
GKN3PP0CG01 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GKN3PP0CG01 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
GKN3PP0CG01 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GKN3PP0CG01 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.38■□□□□ 0.85
GKN3PP0CG01 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GKN3PP0CG01 GUSBP5-202ENST00000510805 1989 ntBASIC20.38■□□□□ 0.85
GKN3PP0CG01 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GKN3PP0CG01 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
GKN3PP0CG01 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GKN3PP0CG01 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GKN3PP0CG01 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.37■□□□□ 0.85
GKN3PP0CG01 FP325331.1-202ENST00000623531 1380 ntBASIC20.37■□□□□ 0.85
GKN3PP0CG01 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GKN3PP0CG01 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GKN3PP0CG01 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.37■□□□□ 0.85
GKN3PP0CG01 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.37■□□□□ 0.85
GKN3PP0CG01 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GKN3PP0CG01 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GKN3PP0CG01 MIR6724-1-201ENST00000616420 92 ntBASIC20.37■□□□□ 0.85
GKN3PP0CG01 MIR6724-2-201ENST00000616483 92 ntBASIC20.37■□□□□ 0.85
GKN3PP0CG01 MIR6724-4-201ENST00000617390 92 ntBASIC20.37■□□□□ 0.85
GKN3PP0CG01 MIR6724-3-201ENST00000622482 92 ntBASIC20.37■□□□□ 0.85
GKN3PP0CG01 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GKN3PP0CG01 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GKN3PP0CG01 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
GKN3PP0CG01 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GKN3PP0CG01 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
GKN3PP0CG01 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GKN3PP0CG01 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GKN3PP0CG01 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GKN3PP0CG01 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
GKN3PP0CG01 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.36■□□□□ 0.85
GKN3PP0CG01 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms