Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFRBP09619 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFRBP09619 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFRBP09619 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.71■■□□□ 1.39
PDGFRBP09619 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.71■■□□□ 1.39
PDGFRBP09619 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.7■■□□□ 1.39
PDGFRBP09619 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDGFRBP09619 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDGFRBP09619 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.7■■□□□ 1.38
PDGFRBP09619 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDGFRBP09619 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDGFRBP09619 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.7■■□□□ 1.38
PDGFRBP09619 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDGFRBP09619 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
PDGFRBP09619 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDGFRBP09619 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDGFRBP09619 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDGFRBP09619 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PDGFRBP09619 AF213884.3-201ENST00000563833 479 ntBASIC23.69■■□□□ 1.38
PDGFRBP09619 AC008764.7-201ENST00000593779 1081 ntBASIC23.69■■□□□ 1.38
PDGFRBP09619 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.69■■□□□ 1.38
PDGFRBP09619 AL136967.2-201ENST00000623968 743 ntBASIC23.69■■□□□ 1.38
PDGFRBP09619 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PDGFRBP09619 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDGFRBP09619 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.69■■□□□ 1.38
PDGFRBP09619 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PDGFRBP09619 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PDGFRBP09619 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDGFRBP09619 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.68■■□□□ 1.38
PDGFRBP09619 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.68■■□□□ 1.38
PDGFRBP09619 AP001330.3-201ENST00000520123 633 ntBASIC23.68■■□□□ 1.38
PDGFRBP09619 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.68■■□□□ 1.38
PDGFRBP09619 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.68■■□□□ 1.38
PDGFRBP09619 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.68■■□□□ 1.38
PDGFRBP09619 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PDGFRBP09619 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDGFRBP09619 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDGFRBP09619 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PDGFRBP09619 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDGFRBP09619 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDGFRBP09619 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDGFRBP09619 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.67■■□□□ 1.38
PDGFRBP09619 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PDGFRBP09619 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PDGFRBP09619 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDGFRBP09619 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDGFRBP09619 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDGFRBP09619 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.67■■□□□ 1.38
PDGFRBP09619 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDGFRBP09619 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PDGFRBP09619 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.67■■□□□ 1.38
PDGFRBP09619 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDGFRBP09619 AC092068.2-201ENST00000590491 1708 ntBASIC23.67■■□□□ 1.38
PDGFRBP09619 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDGFRBP09619 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.67■■□□□ 1.38
PDGFRBP09619 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.67■■□□□ 1.38
PDGFRBP09619 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDGFRBP09619 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDGFRBP09619 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PDGFRBP09619 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDGFRBP09619 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PDGFRBP09619 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.66■■□□□ 1.38
PDGFRBP09619 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDGFRBP09619 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDGFRBP09619 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.65■■□□□ 1.38
PDGFRBP09619 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDGFRBP09619 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
PDGFRBP09619 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
PDGFRBP09619 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PDGFRBP09619 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.65■■□□□ 1.38
PDGFRBP09619 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDGFRBP09619 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDGFRBP09619 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
PDGFRBP09619 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDGFRBP09619 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.65■■□□□ 1.38
PDGFRBP09619 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.65■■□□□ 1.38
PDGFRBP09619 MIR939-201ENST00000401314 82 ntBASIC23.65■■□□□ 1.38
PDGFRBP09619 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.65■■□□□ 1.38
PDGFRBP09619 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.65■■□□□ 1.38
PDGFRBP09619 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDGFRBP09619 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDGFRBP09619 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDGFRBP09619 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDGFRBP09619 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDGFRBP09619 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDGFRBP09619 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDGFRBP09619 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PDGFRBP09619 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDGFRBP09619 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDGFRBP09619 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.64■■□□□ 1.37
PDGFRBP09619 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDGFRBP09619 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PDGFRBP09619 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.63■■□□□ 1.37
PDGFRBP09619 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDGFRBP09619 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDGFRBP09619 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDGFRBP09619 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.63■■□□□ 1.37
PDGFRBP09619 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDGFRBP09619 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.63■■□□□ 1.37
PDGFRBP09619 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms