Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC14.13□□□□□ -0.15
APOBP04114 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.13□□□□□ -0.15
APOBP04114 MFSD11-216ENST00000590393 1141 ntBASIC14.13□□□□□ -0.15
APOBP04114 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
APOBP04114 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.13□□□□□ -0.15
APOBP04114 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.13□□□□□ -0.15
APOBP04114 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.13□□□□□ -0.15
APOBP04114 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOBP04114 HLA-L-211ENST00000482052 1765 ntBASIC14.13□□□□□ -0.15
APOBP04114 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOBP04114 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOBP04114 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC14.12□□□□□ -0.15
APOBP04114 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.12□□□□□ -0.15
APOBP04114 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.12□□□□□ -0.15
APOBP04114 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.12□□□□□ -0.15
APOBP04114 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOBP04114 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.12□□□□□ -0.15
APOBP04114 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBP04114 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBP04114 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBP04114 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBP04114 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOBP04114 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.12□□□□□ -0.15
APOBP04114 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.12□□□□□ -0.15
APOBP04114 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.11□□□□□ -0.15
APOBP04114 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOBP04114 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC14.11□□□□□ -0.15
APOBP04114 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOBP04114 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOBP04114 CD99P1-205ENST00000527459 561 ntBASIC14.11□□□□□ -0.15
APOBP04114 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOBP04114 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
APOBP04114 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOBP04114 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
APOBP04114 SHF-207ENST00000560540 2062 ntTSL 5 BASIC14.11□□□□□ -0.15
APOBP04114 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC14.11□□□□□ -0.15
APOBP04114 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOBP04114 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOBP04114 SHD-204ENST00000599689 1729 ntTSL 5 BASIC14.11□□□□□ -0.15
APOBP04114 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBP04114 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBP04114 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBP04114 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBP04114 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBP04114 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.1□□□□□ -0.15
APOBP04114 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBP04114 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBP04114 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBP04114 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
APOBP04114 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBP04114 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBP04114 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBP04114 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBP04114 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBP04114 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.1□□□□□ -0.15
APOBP04114 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBP04114 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.1□□□□□ -0.15
APOBP04114 LINC02228-203ENST00000641970 1355 ntBASIC14.09□□□□□ -0.15
APOBP04114 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBP04114 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOBP04114 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBP04114 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOBP04114 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
APOBP04114 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOBP04114 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBP04114 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBP04114 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOBP04114 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.09□□□□□ -0.15
APOBP04114 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBP04114 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBP04114 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOBP04114 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBP04114 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBP04114 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBP04114 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBP04114 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBP04114 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBP04114 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBP04114 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.08□□□□□ -0.16
APOBP04114 KRT18P11-201ENST00000435214 1283 ntBASIC14.08□□□□□ -0.16
APOBP04114 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBP04114 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.08□□□□□ -0.16
APOBP04114 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBP04114 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
APOBP04114 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
APOBP04114 AC098590.1-201ENST00000468126 897 ntBASIC14.08□□□□□ -0.16
APOBP04114 AC092803.2-201ENST00000564287 1899 ntBASIC14.08□□□□□ -0.16
APOBP04114 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.08□□□□□ -0.16
APOBP04114 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.08□□□□□ -0.16
APOBP04114 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms